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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   LOL2   lsd one like 2 
 ath-u.5   LOL2   lsd one like 2 
 ath-r.7   LOL2   lsd one like 2 
 ath-m.9   LOL2   lsd one like 2 
 ath-m.4.bio   LOL2   lsd one like 2 
 ath-m.4.hor   LOL2   lsd one like 2 
 ath-m.4.lig   LOL2   lsd one like 2 
 ath-m.4.str   LOL2   lsd one like 2 
 ath-m.4.tis   LOL2   lsd one like 2 
 bra-r.6   103834185   protein LOL2 
 bna-r.1   125577353   protein LOL2-like 
 bna-r.1   106432137   protein LOL2 
 bna-r.1   125594506   protein LOL2-like 
 ghi-r.1   107913973   protein LOL2 
 ghi-r.1   107905779   protein LOL2 
 cit-r.1   102628479   protein LOL2 
 gma-u.5   100780865   protein LOL2 
 vvi-u.5   100265410   protein LOL2 
 ppo-u.5   7456797   protein LOL2 
 mtr-u.5   25493167   protein LOL2 
 sly-u.5   101248737   uncharacterized LOC101248737 
 sot-r.1   102593239   uncharacterized LOC102593239 
 nta-r.1   107771620   uncharacterized LOC107771620 
 nta-r.1   107818482   uncharacterized LOC107818482 
 osa-u.5   4325320   fibrous sheath CABYR-binding protein 
 zma-u.5   103651605   proline-rich protein 36 
 tae-r.2   123078554   fibrous sheath CABYR-binding protein 
 hvu-r.1   123443867   proline-rich protein 36-like 
 sbi-r.1   8084818   proline-rich protein 36 
 bdi-r.1   100840817   proline-rich protein 36 

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Top 50 coexpressed genes to LOL2 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LOL2 (ath-e.2 coexpression data)

CoexMap"828248"


athLOL2 | Entrez gene ID : 828248      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 3 2 1 1 1 1 1 1 1 2 1 1 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009617 [list] [network] response to bacterium  (500 genes)  IEP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001329633.1 [sequence] [blastp]
NP_193892.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  plas 1,  mito_plas 1  (predict for NP_001329633.1)
chlo 10  (predict for NP_193892.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001329633.1)
other 8  (predict for NP_193892.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
LOL2
ath-u.5
for
LOL2
ath-r.7
for
LOL2
ath-m.9
for
LOL2
ath-m.4.bio
for
LOL2
ath-m.4.hor
for
LOL2
ath-m.4.lig
for
LOL2
ath-m.4.str
for
LOL2
ath-m.4.tis
for
LOL2
bra-r.6
for
103834185
bna-r.1
for
125577353
bna-r.1
for
106432137
bna-r.1
for
125594506
ghi-r.1
for
107913973
ghi-r.1
for
107905779
cit-r.1
for
102628479
gma-u.5
for
100780865
vvi-u.5
for
100265410
ppo-u.5
for
7456797
mtr-u.5
for
25493167
sly-u.5
for
101248737
sot-r.1
for
102593239
nta-r.1
for
107771620
nta-r.1
for
107818482
osa-u.5
for
4325320
zma-u.5
for
103651605
tae-r.2
for
123078554
hvu-r.1
for
123443867
sbi-r.1
for
8084818
bdi-r.1
for
100840817


Ortholog ID: 11716
Species ath bra bna bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae hvu sbi bdi
Symbol LOL2 LOC103834185 LOC125577353 LOC106432137 LOC125594506 LOC107913973 LOC107905779 LOC102628479 LOC100780865 LOC100265410 LOC7456797 LOC25493167 LOC101248737 LOC102593239 LOC107771620 LOC107818482 LOC4325320 LOC103651605 LOC123078554 LOC123443867 LOC8084818 LOC100840817
Function* lsd one like 2 protein LOL2 protein LOL2-like protein LOL2 protein LOL2-like protein LOL2 protein LOL2 protein LOL2 protein LOL2 protein LOL2 protein LOL2 protein LOL2 uncharacterized LOC101248737 uncharacterized LOC102593239 uncharacterized LOC107771620 uncharacterized LOC107818482 fibrous sheath CABYR-binding protein proline-rich protein 36 fibrous sheath CABYR-binding protein proline-rich protein 36-like proline-rich protein 36 proline-rich protein 36
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
ghi00230 Purine metabolism 2
ghi00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit04136 Autophagy - other 2
cit00190 Oxidative phosphorylation 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 6
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828248 103834185 125577353 106432137 125594506 107913973 107905779 102628479 100780865 100265410 7456797 25493167 101248737 102593239 107771620 107818482 4325320 103651605 123078554 123443867 8084818 100840817
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