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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   PPT1   polyprenyltransferase 1 
 ath-u.5   PPT1   polyprenyltransferase 1 
 ath-r.7   PPT1   polyprenyltransferase 1 
 ath-m.9   PPT1   polyprenyltransferase 1 
 ath-m.4.bio   PPT1   polyprenyltransferase 1 
 ath-m.4.hor   PPT1   polyprenyltransferase 1 
 ath-m.4.lig   PPT1   polyprenyltransferase 1 
 ath-m.4.str   PPT1   polyprenyltransferase 1 
 ath-m.4.tis   PPT1   polyprenyltransferase 1 
 bra-r.6   103861340   4-hydroxybenzoate polyprenyltransferase, mitochondrial 
 bna-r.1   125580119   4-hydroxybenzoate polyprenyltransferase, mitochondrial-like 
 ghi-r.1   107946115   4-hydroxybenzoate polyprenyltransferase, mitochondrial 
 ghi-r.1   107937599   4-hydroxybenzoate polyprenyltransferase, mitochondrial 
 cit-r.1   102612886   4-hydroxybenzoate polyprenyltransferase, mitochondrial 
 gma-u.5   100797753   4-hydroxybenzoate polyprenyltransferase, mitochondrial 
 vvi-u.5   100247403   4-hydroxybenzoate polyprenyltransferase, mitochondrial 
 ppo-u.5   7492082   4-hydroxybenzoate polyprenyltransferase, mitochondrial 
 ppo-u.5   7486384   4-hydroxybenzoate polyprenyltransferase, mitochondrial 
 mtr-u.5   11435847   4-hydroxybenzoate polyprenyltransferase, mitochondrial 
 sly-u.5   101246522   4-hydroxybenzoate geranyltransferase 2 
 sot-r.1   102595300   4-hydroxybenzoate polyprenyltransferase, mitochondrial 
 nta-r.1   107804153   4-hydroxybenzoate geranyltransferase 2 
 nta-r.1   107803398   4-hydroxybenzoate geranyltransferase 2 
 osa-u.5   4345268   4-hydroxybenzoate polyprenyltransferase, mitochondrial 
 zma-u.5   100282174   para-hydroxybenzoate--polyprenyltransferase 
 tae-r.2   123142252   4-hydroxybenzoate polyprenyltransferase, mitochondrial 
 hvu-r.1   123401702   4-hydroxybenzoate polyprenyltransferase, mitochondrial-like 
 sbi-r.1   8084454   4-hydroxybenzoate polyprenyltransferase, mitochondrial 
 cre-r.1   CHLRE_06g291800v5   uncharacterized protein 

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Top 50 coexpressed genes to PPT1 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PPT1 (ath-e.2 coexpression data)

CoexMap"828466"


athPPT1 | Entrez gene ID : 828466      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi cre bdi
Paralog 9 1 1 2 1 1 1 2 1 1 1 2 1 1 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (40 genes)
ath01240 [list] [network] Biosynthesis of cofactors (237 genes)
GO BP
GO:0006744 [list] [network] ubiquinone biosynthetic process  (11 genes)  IGI  
GO:0009625 [list] [network] response to insect  (66 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
GO:0008412 [list] [network] 4-hydroxybenzoate polyprenyltransferase activity  (1 genes)  IGI  
Protein NP_001190815.1 [sequence] [blastp]
NP_001320050.1 [sequence] [blastp]
NP_001328939.1 [sequence] [blastp]
NP_567688.1 [sequence] [blastp]
NP_849431.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for NP_001190815.1)
chlo 8,  mito 1  (predict for NP_001320050.1)
chlo 8,  mito 1  (predict for NP_001328939.1)
chlo 8,  mito 1  (predict for NP_567688.1)
chlo 8,  mito 1  (predict for NP_849431.1)
Subcellular
localization
TargetP
mito 8,  chlo 3  (predict for NP_001190815.1)
mito 8,  chlo 3  (predict for NP_001320050.1)
mito 8,  chlo 3  (predict for NP_001328939.1)
mito 8,  chlo 3  (predict for NP_567688.1)
mito 8,  chlo 3  (predict for NP_849431.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
PPT1
ath-u.5
for
PPT1
ath-r.7
for
PPT1
ath-m.9
for
PPT1
ath-m.4.bio
for
PPT1
ath-m.4.hor
for
PPT1
ath-m.4.lig
for
PPT1
ath-m.4.str
for
PPT1
ath-m.4.tis
for
PPT1
bra-r.6
for
103861340
bna-r.1
for
125580119
ghi-r.1
for
107946115
ghi-r.1
for
107937599
cit-r.1
for
102612886
gma-u.5
for
100797753
vvi-u.5
for
100247403
ppo-u.5
for
7492082
ppo-u.5
for
7486384
mtr-u.5
for
11435847
sly-u.5
for
101246522
sot-r.1
for
102595300
nta-r.1
for
107804153
nta-r.1
for
107803398
osa-u.5
for
4345268
zma-u.5
for
100282174
tae-r.2
for
123142252
hvu-r.1
for
123401702
sbi-r.1
for
8084454
cre-r.1
for
CHLRE_06g291800v5


Ortholog ID: 8555
Species ath bra bna bna ghi ghi cit gma vvi ppo ppo mtr sly sot nta nta osa zma tae hvu sbi cre
Symbol PPT1 LOC103861340 LOC125580119 LOC106376325 LOC107946115 LOC107937599 LOC102612886 LOC100797753 LOC100247403 LOC7492082 LOC7486384 LOC11435847 LOC101246522 LOC102595300 LOC107804153 LOC107803398 LOC4345268 LOC100282174 LOC123142252 LOC123401702 LOC8084454 CHLRE_06g291800v5
Function* polyprenyltransferase 1 4-hydroxybenzoate polyprenyltransferase, mitochondrial 4-hydroxybenzoate polyprenyltransferase, mitochondrial-like 4-hydroxybenzoate polyprenyltransferase, mitochondrial 4-hydroxybenzoate polyprenyltransferase, mitochondrial 4-hydroxybenzoate polyprenyltransferase, mitochondrial 4-hydroxybenzoate polyprenyltransferase, mitochondrial 4-hydroxybenzoate polyprenyltransferase, mitochondrial 4-hydroxybenzoate polyprenyltransferase, mitochondrial 4-hydroxybenzoate polyprenyltransferase, mitochondrial 4-hydroxybenzoate polyprenyltransferase, mitochondrial 4-hydroxybenzoate polyprenyltransferase, mitochondrial 4-hydroxybenzoate geranyltransferase 2 4-hydroxybenzoate polyprenyltransferase, mitochondrial 4-hydroxybenzoate geranyltransferase 2 4-hydroxybenzoate geranyltransferase 2 4-hydroxybenzoate polyprenyltransferase, mitochondrial para-hydroxybenzoate--polyprenyltransferase 4-hydroxybenzoate polyprenyltransferase, mitochondrial 4-hydroxybenzoate polyprenyltransferase, mitochondrial-like 4-hydroxybenzoate polyprenyltransferase, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 2
bra00240 Pyrimidine metabolism 2
bra00760 Nicotinate and nicotinamide metabolism 2
bra01232 Nucleotide metabolism 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna00190 Oxidative phosphorylation 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
bna04145 Phagosome 5
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 6
gma00620 Pyruvate metabolism 5
gma00061 Fatty acid biosynthesis 4
gma01212 Fatty acid metabolism 4
gma00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 5
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 3
zma03008 Ribosome biogenesis in eukaryotes 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828466 103861340 125580119 106376325 107946115 107937599 102612886 100797753 100247403 7492082 7486384 11435847 101246522 102595300 107804153 107803398 4345268 100282174 123142252 123401702 8084454 5721103
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