ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-e.2	AT4G38200	SEC7-like guanine nucleotide exchange family protein
ath-u.5	AT4G38200	SEC7-like guanine nucleotide exchange family protein
ath-r.7	AT4G38200	SEC7-like guanine nucleotide exchange family protein
ath-m.9	AT4G38200	SEC7-like guanine nucleotide exchange family protein
ath-m.4.bio	AT4G38200	SEC7-like guanine nucleotide exchange family protein
ath-m.4.hor	AT4G38200	SEC7-like guanine nucleotide exchange family protein
ath-m.4.lig	AT4G38200	SEC7-like guanine nucleotide exchange family protein
ath-m.4.str	AT4G38200	SEC7-like guanine nucleotide exchange family protein
ath-m.4.tis	AT4G38200	SEC7-like guanine nucleotide exchange family protein
ath-u.5	AT3G60860	SEC7-like guanine nucleotide exchange family protein
ath-u.5	AT4G35380	SEC7-like guanine nucleotide exchange family protein
ath-u.5	EDA10	SEC7-like guanine nucleotide exchange family protein
bra-r.6	103843820	brefeldin A-inhibited guanine nucleotide-exchange protein 3
bra-r.6	103862856	brefeldin A-inhibited guanine nucleotide-exchange protein 2
bra-r.6	103828580	brefeldin A-inhibited guanine nucleotide-exchange protein 4
bna-r.1	106375252	brefeldin A-inhibited guanine nucleotide-exchange protein 4
bna-r.1	106454724	brefeldin A-inhibited guanine nucleotide-exchange protein 4-like
bna-r.1	106426028	brefeldin A-inhibited guanine nucleotide-exchange protein 3
ghi-r.1	107908975	brefeldin A-inhibited guanine nucleotide-exchange protein 1
ghi-r.1	107911917	brefeldin A-inhibited guanine nucleotide-exchange protein 2
ghi-r.1	107922132	brefeldin A-inhibited guanine nucleotide-exchange protein 2
cit-r.1	102630006	brefeldin A-inhibited guanine nucleotide-exchange protein 2
cit-r.1	102612698	brefeldin A-inhibited guanine nucleotide-exchange protein 1
gma-u.5	100783833	brefeldin A-inhibited guanine nucleotide-exchange protein 2
gma-u.5	100778814	brefeldin A-inhibited guanine nucleotide-exchange protein 2
gma-u.5	100798955	brefeldin A-inhibited guanine nucleotide-exchange protein 2
vvi-u.5	100250634	brefeldin A-inhibited guanine nucleotide-exchange protein 2
vvi-u.5	100250471	brefeldin A-inhibited guanine nucleotide-exchange protein 1
ppo-u.5	7494008	brefeldin A-inhibited guanine nucleotide-exchange protein 2
ppo-u.5	7464867	brefeldin A-inhibited guanine nucleotide-exchange protein 2
ppo-u.5	7463353	brefeldin A-inhibited guanine nucleotide-exchange protein 1
mtr-u.5	11427277	brefeldin A-inhibited guanine nucleotide-exchange protein 2
mtr-u.5	11430236	brefeldin A-inhibited guanine nucleotide-exchange protein 1
mtr-u.5	25501014	brefeldin A-inhibited guanine nucleotide-exchange protein 2
sly-u.5	101260383	brefeldin A-inhibited guanine nucleotide-exchange protein 1
sly-u.5	101254941	brefeldin A-inhibited guanine nucleotide-exchange protein 2-like
sot-r.1	102590847	brefeldin A-inhibited guanine nucleotide-exchange protein 1
sot-r.1	102582128	brefeldin A-inhibited guanine nucleotide-exchange protein 2-like
nta-r.1	107776500	brefeldin A-inhibited guanine nucleotide-exchange protein 1
nta-r.1	107831326	brefeldin A-inhibited guanine nucleotide-exchange protein 2
nta-r.1	107810397	brefeldin A-inhibited guanine nucleotide-exchange protein 2
osa-u.5	4328595	brefeldin A-inhibited guanine nucleotide-exchange protein 1
osa-u.5	4332241	brefeldin A-inhibited guanine nucleotide-exchange protein 2
osa-u.5	4341555	brefeldin A-inhibited guanine nucleotide-exchange protein 1
zma-u.5	103654846	brefeldin A-inhibited guanine nucleotide-exchange protein 1
zma-u.5	100857099	guanine-nucleotide-exchange protein
zma-u.5	103638791	brefeldin A-inhibited guanine nucleotide-exchange protein 1
tae-r.2	123136766	brefeldin A-inhibited guanine nucleotide-exchange protein 1
tae-r.2	123092771	brefeldin A-inhibited guanine nucleotide-exchange protein 2
tae-r.2	123164722	brefeldin A-inhibited guanine nucleotide-exchange protein 1
hvu-r.1	123449160	brefeldin A-inhibited guanine nucleotide-exchange protein 2
hvu-r.1	123404403	brefeldin A-inhibited guanine nucleotide-exchange protein 1-like
hvu-r.1	123413033	brefeldin A-inhibited guanine nucleotide-exchange protein 1-like
sbi-r.1	8083467	brefeldin A-inhibited guanine nucleotide-exchange protein 1
sbi-r.1	8071622	brefeldin A-inhibited guanine nucleotide-exchange protein 1
sbi-r.1	8054344	brefeldin A-inhibited guanine nucleotide-exchange protein 2
bdi-r.1	100845351	brefeldin A-inhibited guanine nucleotide-exchange protein 1
bdi-r.1	100840767	brefeldin A-inhibited guanine nucleotide-exchange protein 2
bdi-r.1	100835333	brefeldin A-inhibited guanine nucleotide-exchange protein 1
cre-r.1	CHLRE_09g390319v5	uncharacterized protein

Top 50 coexpressed genes to AT4G38200 (ath-e.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT4G38200 (ath-e.2 coexpression data)

CoexMap"829976"

[Cytoscape]

Annotation

functional annotation

KEGG

ath04144 [list] [network] Endocytosis (156 genes)

GO BP

GO:0032012 [list] [network] regulation of ARF protein signal transduction

(8 genes)

IEA

GO CC

GO:0009507 [list] [network] chloroplast	(5014 genes)	HDA
GO:0005634 [list] [network] nucleus	(10367 genes)	ISM

GO MF

Protein

NP_001328040.1 [sequence] [blastp]
NP_195533.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, chlo 3, nucl 2, cyto_pero 2, cyto_E.R. 2	(predict for NP_001328040.1)
chlo 7, nucl 2	(predict for NP_195533.2)

Subcellular
localization
TargetP

chlo 3	(predict for NP_001328040.1)
other 5	(predict for NP_195533.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-e.2 for AT4G38200	ath-u.5 for AT4G38200	ath-r.7 for AT4G38200	ath-m.9 for AT4G38200	ath-m.4.bio for AT4G38200	ath-m.4.hor for AT4G38200	ath-m.4.lig for AT4G38200	ath-m.4.str for AT4G38200	ath-m.4.tis for AT4G38200	ath-u.5 for AT3G60860	ath-u.5 for AT4G35380	ath-u.5 for EDA10	bra-r.6 for 103843820	bra-r.6 for 103862856	bra-r.6 for 103828580	bna-r.1 for 106375252	bna-r.1 for 106454724	bna-r.1 for 106426028	ghi-r.1 for 107908975	ghi-r.1 for 107911917	ghi-r.1 for 107922132	cit-r.1 for 102630006	cit-r.1 for 102612698	gma-u.5 for 100783833	gma-u.5 for 100778814	gma-u.5 for 100798955	vvi-u.5 for 100250634	vvi-u.5 for 100250471	ppo-u.5 for 7494008	ppo-u.5 for 7464867	ppo-u.5 for 7463353	mtr-u.5 for 11427277	mtr-u.5 for 11430236	mtr-u.5 for 25501014	sly-u.5 for 101260383	sly-u.5 for 101254941	sot-r.1 for 102590847	sot-r.1 for 102582128	nta-r.1 for 107776500	nta-r.1 for 107831326	nta-r.1 for 107810397	osa-u.5 for 4328595	osa-u.5 for 4332241	osa-u.5 for 4341555	zma-u.5 for 103654846	zma-u.5 for 100857099	zma-u.5 for 103638791	tae-r.2 for 123136766	tae-r.2 for 123092771	tae-r.2 for 123164722	hvu-r.1 for 123449160	hvu-r.1 for 123404403	hvu-r.1 for 123413033	sbi-r.1 for 8083467	sbi-r.1 for 8071622	sbi-r.1 for 8054344	bdi-r.1 for 100845351	bdi-r.1 for 100840767	bdi-r.1 for 100835333	cre-r.1 for CHLRE_09g390319v5

Ortholog

Ortholog ID: 1583

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

EDA10

Function^*

SEC7-like guanine nucleotide exchange family protein

brefeldin A-inhibited guanine nucleotide-exchange protein 2

brefeldin A-inhibited guanine nucleotide-exchange protein 4