ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-e.2	AT5G07980	dentin sialophosphoprotein-like protein
ath-u.5	AT5G07980	dentin sialophosphoprotein-like protein
ath-r.7	AT5G07980	dentin sialophosphoprotein-like protein
ath-u.5	AT5G07940	dentin sialophosphoprotein-like protein
ath-u.5	AT5G07970	dentin sialophosphoprotein-like protein
bra-r.6	103850677	uncharacterized LOC103850677
bra-r.6	103865421	uncharacterized LOC103865421
bna-r.1	106380517	uncharacterized LOC106380517
bna-r.1	106424765	uncharacterized LOC106424765
ghi-r.1	121209637	uncharacterized LOC121209637
ghi-r.1	107906257	uncharacterized LOC107906257
ghi-r.1	107910317	uncharacterized LOC107910317
cit-r.1	102629487	uncharacterized LOC102629487
gma-u.5	100810428	uncharacterized LOC100810428
gma-u.5	100806232	uncharacterized LOC100806232
gma-u.5	100780128	uncharacterized LOC100780128
vvi-u.5	100265641	uncharacterized LOC100265641
vvi-u.5	100260052	uncharacterized LOC100260052
ppo-u.5	18105727	uncharacterized LOC18105727
ppo-u.5	7487100	uncharacterized LOC7487100
ppo-u.5	18103751	uncharacterized LOC18103751
mtr-u.5	25493876	uncharacterized LOC25493876
mtr-u.5	25488699	uncharacterized LOC25488699
sly-u.5	101261531	uncharacterized LOC101261531
sly-u.5	101267696	uncharacterized LOC101267696
sly-u.5	101247194	uncharacterized LOC101247194
sot-r.1	102595846	uncharacterized LOC102595846
sot-r.1	102606113	uncharacterized LOC102606113
sot-r.1	102603145	uncharacterized LOC102603145
nta-r.1	107799002	uncharacterized LOC107799002
nta-r.1	107768512	uncharacterized LOC107768512
nta-r.1	107807076	uncharacterized LOC107807076
osa-u.5	4332044	uncharacterized LOC4332044
osa-u.5	4348293	uncharacterized LOC4348293
zma-u.5	100381929	uncharacterized LOC100381929
zma-u.5	103632668	uncharacterized LOC103632668
tae-r.2	123098259	uncharacterized LOC123098259
tae-r.2	123085071	uncharacterized LOC123085071
tae-r.2	123092985	uncharacterized LOC123092985
hvu-r.1	123449328	uncharacterized LOC123449328
sbi-r.1	8057348	uncharacterized protein DDB_G0283357
bdi-r.1	100835666	uncharacterized LOC100835666

Top 50 coexpressed genes to AT5G07980 (ath-e.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT5G07980 (ath-e.2 coexpression data)

CoexMap"830692"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009506 [list] [network] plasmodesma	(874 genes)	HDA
GO:0005634 [list] [network] nucleus	(10367 genes)	ISM

GO MF

Protein

NP_001331534.1 [sequence] [blastp]
NP_196415.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for NP_001331534.1)
nucl 10	(predict for NP_196415.1)

Subcellular
localization
TargetP

other 9	(predict for NP_001331534.1)
other 9	(predict for NP_196415.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-e.2 for AT5G07980	ath-u.5 for AT5G07980	ath-r.7 for AT5G07980	ath-u.5 for AT5G07940	ath-u.5 for AT5G07970	bra-r.6 for 103850677	bra-r.6 for 103865421	bna-r.1 for 106380517	bna-r.1 for 106424765	ghi-r.1 for 121209637	ghi-r.1 for 107906257	ghi-r.1 for 107910317	cit-r.1 for 102629487	gma-u.5 for 100810428	gma-u.5 for 100806232	gma-u.5 for 100780128	vvi-u.5 for 100265641	vvi-u.5 for 100260052	ppo-u.5 for 18105727	ppo-u.5 for 7487100	ppo-u.5 for 18103751	mtr-u.5 for 25493876	mtr-u.5 for 25488699	sly-u.5 for 101261531	sly-u.5 for 101267696	sly-u.5 for 101247194	sot-r.1 for 102595846	sot-r.1 for 102606113	sot-r.1 for 102603145	nta-r.1 for 107799002	nta-r.1 for 107768512	nta-r.1 for 107807076	osa-u.5 for 4332044	osa-u.5 for 4348293	zma-u.5 for 100381929	zma-u.5 for 103632668	tae-r.2 for 123098259	tae-r.2 for 123085071	tae-r.2 for 123092985	hvu-r.1 for 123449328	sbi-r.1 for 8057348	bdi-r.1 for 100835666

Ortholog

Ortholog ID: 1979

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

dentin sialophosphoprotein-like protein

uncharacterized LOC103850677

uncharacterized LOC103865421

uncharacterized LOC106447148

uncharacterized LOC106447149

uncharacterized LOC107913498

uncharacterized LOC107946533

uncharacterized LOC107887104

uncharacterized LOC102629487

uncharacterized LOC100806232

uncharacterized LOC100780128

uncharacterized LOC100800079

uncharacterized LOC100265641

uncharacterized LOC100260052

uncharacterized LOC18105727

uncharacterized LOC7487100

uncharacterized LOC18105730

uncharacterized LOC25493876

uncharacterized LOC25488699

uncharacterized LOC101261531

uncharacterized LOC101267696

uncharacterized LOC101247194

uncharacterized LOC102595846

uncharacterized LOC102606113

uncharacterized LOC102603145

uncharacterized LOC107807076

uncharacterized LOC107808417

uncharacterized LOC107770170

uncharacterized LOC4332044

uncharacterized LOC4348293

uncharacterized LOC100381929

uncharacterized LOC103632668

uncharacterized LOC123098259

uncharacterized LOC123085071

uncharacterized LOC123092985

uncharacterized LOC123449328

uncharacterized protein DDB_G0283357

uncharacterized LOC100835666

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03083	Polycomb repressive complex	3
bra03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	4
ghi03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3
gma03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	3
vvi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4
mtr00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	5
mtr03082	ATP-dependent chromatin remodeling	2
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	3
sly03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03250	Viral life cycle - HIV-1	2
sot03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03083	Polycomb repressive complex	3
nta03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03083	Polycomb repressive complex	2
zma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03420	Nucleotide excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2
bdi03082	ATP-dependent chromatin remodeling	2

Expression

Expression pattern

Entrez Gene ID^*

830688

830691

103850677

103865421

106447148

106447149

107913498

107946533

107887104

102629487

100806232

100780128

100800079

100265641

100260052

18105727

7487100

18105730

25493876

25488699

101261531

101267696

101247194

102595846

102606113

102603145

107807076

107808417

107770170

4332044

4348293

100381929

103632668

123098259

123085071

123092985

123449328

8057348

100835666

The preparation time of this page was 0.4 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	2	2	3	1	3	2	3	2	3	3	3	2	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G07980 (ath-e.2 coexpression data)

Top 50 enrichment test to AT5G07980 (ath-e.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**