ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-e.2	AT5G16250	uncharacterized protein
ath-u.5	AT5G16250	uncharacterized protein
ath-r.7	AT5G16250	uncharacterized protein
ath-m.9	AT5G16250	uncharacterized protein
ath-m.4.bio	AT5G16250	uncharacterized protein
ath-m.4.hor	AT5G16250	uncharacterized protein
ath-m.4.lig	AT5G16250	uncharacterized protein
ath-m.4.str	AT5G16250	uncharacterized protein
ath-m.4.tis	AT5G16250	uncharacterized protein
ath-u.5	AT3G02640	uncharacterized protein
ath-u.5	AT5G36710	uncharacterized protein
ath-u.5	AT5G36800	uncharacterized protein
bra-r.6	103856188	uncharacterized LOC103856188
bra-r.6	103849166	uncharacterized LOC103849166
bra-r.6	103846341	uncharacterized LOC103846341
bna-r.1	111210991	uncharacterized LOC111210991
bna-r.1	111206370	uncharacterized LOC111206370
bna-r.1	BNAC04G30030D	uncharacterized BNAC04G30030D
ghi-r.1	107903374	uncharacterized LOC107903374
ghi-r.1	107928431	uncharacterized LOC107928431
ghi-r.1	121214041	uncharacterized LOC121214041
cit-r.1	102608877	hypothetical protein
cit-r.1	102610254	uncharacterized LOC102610254
gma-u.5	100527525	uncharacterized LOC100527525
gma-u.5	100500130	uncharacterized LOC100500130
vvi-u.5	100267455	uncharacterized LOC100267455
ppo-u.5	7474391	uncharacterized LOC7474391
ppo-u.5	18108512	uncharacterized LOC18108512
ppo-u.5	18104599	uncharacterized LOC18104599
mtr-u.5	11437434	uncharacterized LOC11437434
mtr-u.5	11408295	uncharacterized LOC11408295
sly-u.5	101250852	uncharacterized LOC101250852
sot-r.1	102597399	uncharacterized LOC102597399
sot-r.1	102604205	uncharacterized LOC102604205
nta-r.1	107801076	uncharacterized LOC107801076
nta-r.1	107762322	uncharacterized LOC107762322
osa-u.5	4339260	uncharacterized LOC4339260
osa-u.5	4336278	uncharacterized LOC4336278
osa-u.5	4325096	uncharacterized LOC4325096
zma-u.5	100277137	uncharacterized LOC100277137
zma-u.5	100192825	uncharacterized LOC100192825
zma-u.5	100382175	uncharacterized LOC100382175
tae-r.2	123058903	uncharacterized LOC123058903
tae-r.2	123053767	uncharacterized LOC123053767
tae-r.2	123041587	uncharacterized LOC123041587
hvu-r.1	123440607	uncharacterized LOC123440607
hvu-r.1	123415852	uncharacterized LOC123415852
hvu-r.1	123430472	uncharacterized LOC123430472
sbi-r.1	8078672	uncharacterized LOC8078672
sbi-r.1	8067484	uncharacterized LOC8067484
sbi-r.1	8060199	uncharacterized LOC8060199
bdi-r.1	100838770	uncharacterized LOC100838770
bdi-r.1	100844835	uncharacterized LOC100844835

Top 50 coexpressed genes to AT5G16250 (ath-e.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT5G16250 (ath-e.2 coexpression data)

CoexMap"831485"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(5014 genes)

ISM

GO MF

Protein

NP_197129.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, cyto 3, plas 1, cyto_nucl 1, cyto_pero 1, cyto_E.R. 1

(predict for NP_197129.1)

Subcellular
localization
TargetP

other 6

(predict for NP_197129.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-e.2 for AT5G16250	ath-u.5 for AT5G16250	ath-r.7 for AT5G16250	ath-m.9 for AT5G16250	ath-m.4.bio for AT5G16250	ath-m.4.hor for AT5G16250	ath-m.4.lig for AT5G16250	ath-m.4.str for AT5G16250	ath-m.4.tis for AT5G16250	ath-u.5 for AT3G02640	ath-u.5 for AT5G36710	ath-u.5 for AT5G36800	bra-r.6 for 103856188	bra-r.6 for 103849166	bra-r.6 for 103846341	bna-r.1 for 111210991	bna-r.1 for 111206370	bna-r.1 for BNAC04G30030D	ghi-r.1 for 107903374	ghi-r.1 for 107928431	ghi-r.1 for 121214041	cit-r.1 for 102608877	cit-r.1 for 102610254	gma-u.5 for 100527525	gma-u.5 for 100500130	vvi-u.5 for 100267455	ppo-u.5 for 7474391	ppo-u.5 for 18108512	ppo-u.5 for 18104599	mtr-u.5 for 11437434	mtr-u.5 for 11408295	sly-u.5 for 101250852	sot-r.1 for 102597399	sot-r.1 for 102604205	nta-r.1 for 107801076	nta-r.1 for 107762322	osa-u.5 for 4339260	osa-u.5 for 4336278	osa-u.5 for 4325096	zma-u.5 for 100277137	zma-u.5 for 100192825	zma-u.5 for 100382175	tae-r.2 for 123058903	tae-r.2 for 123053767	tae-r.2 for 123041587	hvu-r.1 for 123440607	hvu-r.1 for 123415852	hvu-r.1 for 123430472	sbi-r.1 for 8078672	sbi-r.1 for 8067484	sbi-r.1 for 8060199	bdi-r.1 for 100838770	bdi-r.1 for 100844835

Ortholog

Ortholog ID: 2033

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized protein

uncharacterized LOC103856188

uncharacterized LOC103849166

uncharacterized LOC103846341

uncharacterized LOC106399299

uncharacterized LOC106443153

uncharacterized LOC106372206

uncharacterized LOC121214041

uncharacterized LOC121223507

uncharacterized LOC107914598

hypothetical protein

uncharacterized LOC102610254

uncharacterized LOC100527525

uncharacterized LOC100500130

uncharacterized LOC100267455

uncharacterized LOC18108512

uncharacterized LOC18104599

uncharacterized LOC7472467

uncharacterized LOC11437434

uncharacterized LOC11408295

uncharacterized LOC101250852

uncharacterized LOC102597399

uncharacterized LOC102604205

uncharacterized LOC107787822

uncharacterized LOC107830826

uncharacterized LOC4339260

uncharacterized LOC4336278

uncharacterized LOC4325096

uncharacterized LOC100277137

uncharacterized LOC100192825

uncharacterized LOC100277515

uncharacterized LOC123041587

uncharacterized LOC123075117

uncharacterized LOC123440607

uncharacterized LOC123415852

uncharacterized LOC123430472

uncharacterized LOC8078672

uncharacterized LOC8067484

uncharacterized LOC8060199

uncharacterized LOC100838770

uncharacterized LOC100844835

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2
cit03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04145	Phagosome	2
vvi04517	IgSF CAM signaling	2
vvi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	2
ppo04517	IgSF CAM signaling	2
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04814	Motor proteins	3
ppo04145	Phagosome	2
ppo04517	IgSF CAM signaling	2
ppo00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2
sly04130	SNARE interactions in vesicular transport	2
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2
nta00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00270	Cysteine and methionine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

821289

833636

833647

103856188

103849166

103846341

106399299

106443153

106372206

121214041

121223507

107914598

102608877

102610254

100527525

100500130

100267455

18108512

18104599

7472467

11437434

11408295

101250852

102597399

102604205

107787822

107830826

4339260

4336278

4325096

100277137

100192825

100277515

123041587

123075117

123440607

123415852

123430472

8078672

8067484

8060199

100838770

100844835

The preparation time of this page was 0.2 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	12	3	3	3	2	2	1	3	2	1	2	2	3	3	3	3	3	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G16250 (ath-e.2 coexpression data)

Top 50 enrichment test to AT5G16250 (ath-e.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**