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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   MBD02   methyl-CPG-binding domain protein 02 
 ath-u.5   MBD02   methyl-CPG-binding domain protein 02 
 ath-r.7   MBD02   methyl-CPG-binding domain protein 02 
 ath-m.9   MBD02   methyl-CPG-binding domain protein 02 
 ath-m.4.bio   MBD02   methyl-CPG-binding domain protein 02 
 ath-m.4.hor   MBD02   methyl-CPG-binding domain protein 02 
 ath-m.4.lig   MBD02   methyl-CPG-binding domain protein 02 
 ath-m.4.str   MBD02   methyl-CPG-binding domain protein 02 
 ath-m.4.tis   MBD02   methyl-CPG-binding domain protein 02 
 bra-r.6   103833733   methyl-CpG-binding domain-containing protein 2 
 bna-r.1   106349926   methyl-CpG-binding domain-containing protein 2 
 bna-r.1   106418761   methyl-CpG-binding domain-containing protein 2-like 
 ghi-r.1   107907522   methyl-CpG-binding domain-containing protein 2 
 ghi-r.1   107907378   methyl-CpG-binding domain-containing protein 2 
 cit-r.1   102619302   methyl-CpG-binding domain-containing protein 2 
 gma-u.5   100810153   methyl-CpG-binding domain-containing protein 2 
 gma-u.5   100790117   methyl-CpG-binding domain-containing protein 2 
 vvi-u.5   100260354   methyl-CpG-binding domain-containing protein 2 
 ppo-u.5   112323251   methyl-CpG-binding domain-containing protein 2 
 ppo-u.5   18107853   methyl-CpG-binding domain-containing protein 2 
 ppo-u.5   7487219   methyl-CpG-binding domain-containing protein 2 
 mtr-u.5   25488816   methyl-CpG-binding domain-containing protein 2 
 mtr-u.5   112419988   methyl-CpG-binding domain-containing protein 2 
 mtr-u.5   112420379   methyl-CpG-binding domain-containing protein 2 
 sly-u.5   101263213   methyl-CpG-binding domain-containing protein 2-like 
 sot-r.1   102588305   methyl-CpG-binding domain-containing protein 2 
 nta-r.1   107783173   methyl-CpG-binding domain-containing protein 2 
 nta-r.1   107788015   methyl-CpG-binding domain-containing protein 2 
 nta-r.1   107820419   methyl-CpG-binding domain-containing protein 2-like 
 osa-u.5   4347452   methyl-CpG-binding domain-containing protein 2 
 zma-u.5   mbd108   methyl-binding domain 108 
 zma-u.5   mbd111   methyl binding domain 111 
 tae-r.2   123121980   methyl-CpG-binding domain-containing protein 2 
 tae-r.2   100049043   methyl-CpG-binding domain-containing protein 2 
 tae-r.2   123112470   methyl-CpG-binding domain-containing protein 2 
 hvu-r.1   123399515   methyl-CpG-binding domain-containing protein 2-like 
 sbi-r.1   8081339   methyl-CpG-binding domain-containing protein 2 
 sbi-r.1   8081340   methyl-CpG-binding domain-containing protein 2 
 sbi-r.1   110432421   methyl-CpG-binding domain-containing protein 2-like 
 bdi-r.1   100832702   methyl-CpG-binding domain-containing protein 2 

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Top 50 coexpressed genes to MBD02 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MBD02 (ath-e.2 coexpression data)

CoexMap"833487"


athMBD02 | Entrez gene ID : 833487      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 3 3 1 1 3 1 2 3 1 3 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006338 [list] [network] chromatin remodeling  (210 genes)  ISS  
GO CC
GO:0016581 [list] [network] NuRD complex  (2 genes)  ISS  
GO:0000118 [list] [network] histone deacetylase complex  (44 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0051747 [list] [network] cytosine C-5 DNA demethylase activity  (6 genes)  IDA  
GO:0019899 [list] [network] enzyme binding  (199 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001190421.1 [sequence] [blastp]
NP_001331130.1 [sequence] [blastp]
NP_198383.1 [sequence] [blastp]
NP_974850.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  chlo 1,  mito 1,  plas 1,  mito_plas 1  (predict for NP_001190421.1)
nucl 6,  cyto_nucl 4,  chlo 1,  mito 1,  plas 1,  mito_plas 1  (predict for NP_001331130.1)
nucl 6,  cyto_nucl 4,  chlo 1,  mito 1,  plas 1,  mito_plas 1  (predict for NP_198383.1)
nucl 6,  cyto_nucl 4,  chlo 1,  mito 1,  plas 1,  mito_plas 1  (predict for NP_974850.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001190421.1)
other 5  (predict for NP_001331130.1)
other 5  (predict for NP_198383.1)
other 5  (predict for NP_974850.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
MBD02
ath-u.5
for
MBD02
ath-r.7
for
MBD02
ath-m.9
for
MBD02
ath-m.4.bio
for
MBD02
ath-m.4.hor
for
MBD02
ath-m.4.lig
for
MBD02
ath-m.4.str
for
MBD02
ath-m.4.tis
for
MBD02
bra-r.6
for
103833733
bna-r.1
for
106349926
bna-r.1
for
106418761
ghi-r.1
for
107907522
ghi-r.1
for
107907378
cit-r.1
for
102619302
gma-u.5
for
100810153
gma-u.5
for
100790117
vvi-u.5
for
100260354
ppo-u.5
for
112323251
ppo-u.5
for
18107853
ppo-u.5
for
7487219
mtr-u.5
for
25488816
mtr-u.5
for
112419988
mtr-u.5
for
112420379
sly-u.5
for
101263213
sot-r.1
for
102588305
nta-r.1
for
107783173
nta-r.1
for
107788015
nta-r.1
for
107820419
osa-u.5
for
4347452
zma-u.5
for
mbd108
zma-u.5
for
mbd111
tae-r.2
for
123121980
tae-r.2
for
100049043
tae-r.2
for
123112470
hvu-r.1
for
123399515
sbi-r.1
for
8081339
sbi-r.1
for
8081340
sbi-r.1
for
110432421
bdi-r.1
for
100832702


Ortholog ID: 5848
Species ath bra bna bna ghi ghi cit gma gma vvi ppo ppo ppo mtr mtr mtr sly sot nta nta nta osa zma zma tae tae tae hvu sbi sbi sbi bdi
Symbol MBD02 LOC103833733 LOC106349926 LOC106418761 LOC107907522 LOC107907378 LOC102619302 LOC100810153 LOC100790117 LOC100260354 LOC112323251 LOC18107853 LOC7487219 LOC25488816 LOC112419988 LOC112420379 LOC101263213 LOC102588305 LOC107783173 LOC107820419 LOC107802733 LOC4347452 mbd108 mbd111 LOC123121980 LOC100049043 LOC123112470 LOC123399515 LOC8081339 LOC8081340 LOC110432421 LOC100832702
Function* methyl-CPG-binding domain protein 02 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2-like methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2-like methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2-like methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-binding domain 108 methyl binding domain 111 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2-like methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2 methyl-CpG-binding domain-containing protein 2-like methyl-CpG-binding domain-containing protein 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 4
bna04120 Ubiquitin mediated proteolysis 4
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 4
bna04120 Ubiquitin mediated proteolysis 4
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 7
ghi04814 Motor proteins 4
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 7
ghi04814 Motor proteins 4
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 3
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 13
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00514 Other types of O-glycan biosynthesis 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi04144 Endocytosis 2
bdi03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833487 103833733 106349926 106418761 107907522 107907378 102619302 100810153 100790117 100260354 112323251 18107853 7487219 25488816 112419988 112420379 101263213 102588305 107783173 107820419 107802733 4347452 542070 542071 123121980 100049043 123112470 123399515 8081339 8081340 110432421 100832702
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