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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   AT5G40670   PQ-loop repeat family protein / transmembrane family protein 
 ath-u.5   AT5G40670   PQ-loop repeat family protein / transmembrane family protein 
 ath-r.7   AT5G40670   PQ-loop repeat family protein / transmembrane family protein 
 ath-m.9   AT5G40670   PQ-loop repeat family protein / transmembrane family protein 
 ath-m.4.bio   AT5G40670   PQ-loop repeat family protein / transmembrane family protein 
 ath-m.4.hor   AT5G40670   PQ-loop repeat family protein / transmembrane family protein 
 ath-m.4.lig   AT5G40670   PQ-loop repeat family protein / transmembrane family protein 
 ath-m.4.str   AT5G40670   PQ-loop repeat family protein / transmembrane family protein 
 ath-m.4.tis   AT5G40670   PQ-loop repeat family protein / transmembrane family protein 
 bra-r.6   103864235   cystinosin homolog 
 bra-r.6   103864016   cystinosin homolog 
 bna-r.1   111205398   cystinosin homolog 
 bna-r.1   106412021   cystinosin homolog 
 bna-r.1   106446174   cystinosin homolog 
 ghi-r.1   107911768   cystinosin homolog 
 ghi-r.1   107922759   cystinosin homolog 
 cit-r.1   102627810   cystinosin homolog 
 gma-u.5   100795576   cystinosin homolog 
 gma-u.5   100795040   cystinosin homolog 
 vvi-u.5   100250884   cystinosin homolog 
 vvi-u.5   100245735   cystinosin homolog 
 ppo-u.5   7461312   cystinosin homolog 
 mtr-u.5   25495664   cystinosin homolog 
 mtr-u.5   25479661   cystinosin homolog 
 sly-u.5   101253846   cystinosin homolog 
 sly-u.5   101253256   cystinosin homolog 
 sot-r.1   102589367   cystinosin homolog 
 sot-r.1   102589926   cystinosin homolog 
 nta-r.1   107818374   cystinosin homolog 
 osa-u.5   4351977   cystinosin homolog 
 zma-u.5   100283468   uncharacterized LOC100283468 
 tae-r.2   123165681   cystinosin homolog 
 tae-r.2   123150170   cystinosin homolog 
 tae-r.2   123158930   cystinosin homolog 
 hvu-r.1   123410217   cystinosin homolog 
 sbi-r.1   110429714   cystinosin homolog 
 bdi-r.1   100840065   cystinosin homolog 

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Top 50 coexpressed genes to AT5G40670 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G40670 (ath-e.2 coexpression data)

CoexMap"834067"


athAT5G40670 | Entrez gene ID : 834067      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 2 1 2 2 2 1 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04142 [list] [network] Lysosome (82 genes)
GO BP
GO CC
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_198883.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  plas 3,  cyto_nucl 3  (predict for NP_198883.1)
Subcellular
localization
TargetP
scret 6,  other 3  (predict for NP_198883.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
AT5G40670
ath-u.5
for
AT5G40670
ath-r.7
for
AT5G40670
ath-m.9
for
AT5G40670
ath-m.4.bio
for
AT5G40670
ath-m.4.hor
for
AT5G40670
ath-m.4.lig
for
AT5G40670
ath-m.4.str
for
AT5G40670
ath-m.4.tis
for
AT5G40670
bra-r.6
for
103864235
bra-r.6
for
103864016
bna-r.1
for
111205398
bna-r.1
for
106412021
bna-r.1
for
106446174
ghi-r.1
for
107911768
ghi-r.1
for
107922759
cit-r.1
for
102627810
gma-u.5
for
100795576
gma-u.5
for
100795040
vvi-u.5
for
100250884
vvi-u.5
for
100245735
ppo-u.5
for
7461312
mtr-u.5
for
25495664
mtr-u.5
for
25479661
sly-u.5
for
101253846
sly-u.5
for
101253256
sot-r.1
for
102589367
sot-r.1
for
102589926
nta-r.1
for
107818374
osa-u.5
for
4351977
zma-u.5
for
100283468
tae-r.2
for
123165681
tae-r.2
for
123150170
tae-r.2
for
123158930
hvu-r.1
for
123410217
sbi-r.1
for
110429714
bdi-r.1
for
100840065


Ortholog ID: 5851
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi vvi ppo mtr mtr sly sly sot sot nta osa zma tae tae tae hvu sbi bdi
Symbol AT5G40670 LOC103864235 LOC103864016 LOC111205398 LOC106446174 LOC106420782 LOC107911768 LOC107922759 LOC102627810 LOC100795576 LOC100795040 LOC100250884 LOC100245735 LOC7461312 LOC25495664 LOC25479661 LOC101253846 LOC101253256 LOC102589367 LOC102589926 LOC107774280 LOC4351977 LOC100283468 LOC123165681 LOC123150170 LOC123158930 LOC123410217 LOC110429714 LOC100840065
Function* PQ-loop repeat family protein / transmembrane family protein cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog uncharacterized LOC100283468 cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog cystinosin homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00920 Sulfur metabolism 4
ath01320 Sulfur cycle 3
ath01200 Carbon metabolism 3
ath00270 Cysteine and methionine metabolism 2
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00920 Sulfur metabolism 5
bra01320 Sulfur cycle 3
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra00920 Sulfur metabolism 3
bra01320 Sulfur cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 2
bna00260 Glycine, serine and threonine metabolism 2
bna00270 Cysteine and methionine metabolism 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00920 Sulfur metabolism 6
bna01200 Carbon metabolism 4
bna01230 Biosynthesis of amino acids 4
bna01320 Sulfur cycle 4
bna04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 2
bna00260 Glycine, serine and threonine metabolism 2
bna00270 Cysteine and methionine metabolism 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 3
ghi00460 Cyanoamino acid metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi00670 One carbon pool by folate 3
ghi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 4
ghi00460 Cyanoamino acid metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00670 One carbon pool by folate 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00270 Cysteine and methionine metabolism 2
cit00920 Sulfur metabolism 2
cit01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00670 One carbon pool by folate 3
gma04981 Folate transport and metabolism 3
gma04142 Lysosome 2
gma00920 Sulfur metabolism 2
gma01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00920 Sulfur metabolism 7
sly01320 Sulfur cycle 5
sly01230 Biosynthesis of amino acids 3
sly00270 Cysteine and methionine metabolism 2
sly00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 3
sly00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 2
sot04142 Lysosome 2
sot00230 Purine metabolism 2
sot00261 Monobactam biosynthesis 2
sot00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00920 Sulfur metabolism 4
sot01320 Sulfur cycle 4
sot00230 Purine metabolism 2
sot00261 Monobactam biosynthesis 2
sot00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00920 Sulfur metabolism 3
osa01320 Sulfur cycle 3
osa00670 One carbon pool by folate 2
osa01200 Carbon metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00920 Sulfur metabolism 3
zma01320 Sulfur cycle 3
zma00230 Purine metabolism 2
zma00261 Monobactam biosynthesis 2
zma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 10
tae04145 Phagosome 10
tae04142 Lysosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 5
tae00190 Oxidative phosphorylation 5
tae04145 Phagosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 7
tae04145 Phagosome 7
tae04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 4
sbi01200 Carbon metabolism 2
sbi01230 Biosynthesis of amino acids 2
sbi00920 Sulfur metabolism 2
sbi01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00450 Selenocompound metabolism 2
bdi00920 Sulfur metabolism 2
bdi00270 Cysteine and methionine metabolism 2
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834067 103864235 103864016 111205398 106446174 106420782 107911768 107922759 102627810 100795576 100795040 100250884 100245735 7461312 25495664 25479661 101253846 101253256 102589367 102589926 107774280 4351977 100283468 123165681 123150170 123158930 123410217 110429714 100840065
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