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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   AT5G47690   binding protein 
 ath-u.5   AT5G47690   binding protein 
 ath-r.7   AT5G47690   binding protein 
 bra-r.6   103827626   sister chromatid cohesion protein PDS5 homolog B 
 bra-r.6   103853833   sister chromatid cohesion protein PDS5 homolog A 
 bna-r.1   125587705   sister chromatid cohesion protein PDS5 homolog A-like 
 bna-r.1   106410296   sister chromatid cohesion protein PDS5 homolog A 
 bna-r.1   106401193   sister chromatid cohesion protein PDS5 homolog A 
 ghi-r.1   107890019   sister chromatid cohesion protein PDS5 homolog A 
 ghi-r.1   107891828   sister chromatid cohesion protein PDS5 homolog A 
 ghi-r.1   107887494   sister chromatid cohesion protein PDS5 homolog A 
 cit-r.1   102609699   sister chromatid cohesion protein PDS5 homolog A 
 gma-u.5   100775397   sister chromatid cohesion protein PDS5 homolog A 
 gma-u.5   100816692   sister chromatid cohesion protein PDS5 homolog A-B 
 gma-u.5   100797921   sister chromatid cohesion protein PDS5 homolog A 
 vvi-u.5   100855126   sister chromatid cohesion protein PDS5 homolog A 
 ppo-u.5   7463647   sister chromatid cohesion protein PDS5 homolog A 
 ppo-u.5   7482634   sister chromatid cohesion protein PDS5 homolog A 
 mtr-u.5   25494325   sister chromatid cohesion protein PDS5 homolog A 
 mtr-u.5   11408726   sister chromatid cohesion protein PDS5 homolog A-B 
 sly-u.5   101266989   sister chromatid cohesion protein PDS5 homolog A 
 sot-r.1   102584418   sister chromatid cohesion protein PDS5 homolog A-A 
 nta-r.1   107786305   sister chromatid cohesion protein PDS5 homolog A 
 osa-u.5   9268318   sister chromatid cohesion protein PDS5 homolog A 
 zma-u.5   103631385   sister chromatid cohesion protein PDS5 homolog A 
 zma-u.5   103638287   sister chromatid cohesion protein PDS5 homolog B 
 tae-r.2   123156959   sister chromatid cohesion protein PDS5 homolog A 
 tae-r.2   123164575   sister chromatid cohesion protein PDS5 homolog A 
 tae-r.2   123150214   sister chromatid cohesion protein PDS5 homolog A 
 hvu-r.1   123409326   sister chromatid cohesion protein PDS5 homolog A 
 sbi-r.1   8055822   sister chromatid cohesion protein PDS5 homolog B 
 bdi-r.1   100826424   sister chromatid cohesion protein PDS5 homolog A 

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Top 50 coexpressed genes to AT5G47690 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G47690 (ath-e.2 coexpression data)

CoexMap"834820"


athAT5G47690 | Entrez gene ID : 834820      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 3 3 1 3 1 2 2 1 1 1 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007064 [list] [network] mitotic sister chromatid cohesion  (13 genes)  IMP  
GO:0009556 [list] [network] microsporogenesis  (28 genes)  IGI  
GO:0035825 [list] [network] homologous recombination  (50 genes)  IMP  
GO:0006310 [list] [network] DNA recombination  (113 genes)  IMP  
GO:0006281 [list] [network] DNA repair  (203 genes)  IGI IMP  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001119389.1 [sequence] [blastp]
NP_001119390.1 [sequence] [blastp]
NP_001331466.1 [sequence] [blastp]
NP_199580.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  E.R. 1,  cyto_plas 1  (predict for NP_001119389.1)
nucl 6,  cyto 2,  E.R. 1,  cyto_plas 1  (predict for NP_001119390.1)
plas 4,  chlo 3,  nucl_plas 3  (predict for NP_001331466.1)
nucl 6,  cyto 2,  E.R. 1  (predict for NP_199580.3)
Subcellular
localization
TargetP
other 8  (predict for NP_001119389.1)
other 8  (predict for NP_001119390.1)
scret 4,  other 3  (predict for NP_001331466.1)
other 8  (predict for NP_199580.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
AT5G47690
ath-u.5
for
AT5G47690
ath-r.7
for
AT5G47690
bra-r.6
for
103827626
bra-r.6
for
103853833
bna-r.1
for
125587705
bna-r.1
for
106410296
bna-r.1
for
106401193
ghi-r.1
for
107890019
ghi-r.1
for
107891828
ghi-r.1
for
107887494
cit-r.1
for
102609699
gma-u.5
for
100775397
gma-u.5
for
100816692
gma-u.5
for
100797921
vvi-u.5
for
100855126
ppo-u.5
for
7463647
ppo-u.5
for
7482634
mtr-u.5
for
25494325
mtr-u.5
for
11408726
sly-u.5
for
101266989
sot-r.1
for
102584418
nta-r.1
for
107786305
osa-u.5
for
9268318
zma-u.5
for
103631385
zma-u.5
for
103638287
tae-r.2
for
123156959
tae-r.2
for
123164575
tae-r.2
for
123150214
hvu-r.1
for
123409326
sbi-r.1
for
8055822
bdi-r.1
for
100826424


Ortholog ID: 6992
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot nta osa zma zma tae tae tae hvu sbi bdi
Symbol AT5G47690 LOC103827626 LOC103853833 LOC106410296 LOC106401193 LOC106400843 LOC107890019 LOC107891828 LOC107887494 LOC102609699 LOC100775397 LOC100816692 LOC100797921 LOC100855126 LOC7463647 LOC7482634 LOC25494325 LOC11408726 LOC101266989 LOC102584418 LOC107786305 LOC9268318 LOC103631385 LOC103638287 LOC123156959 LOC123164575 LOC123150214 LOC123409326 LOC8055822 LOC100826424
Function* binding protein sister chromatid cohesion protein PDS5 homolog B sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A-like sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A-B sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A-B sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A-A sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog B sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog A sister chromatid cohesion protein PDS5 homolog B sister chromatid cohesion protein PDS5 homolog A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
ath04814 Motor proteins 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03450 Non-homologous end-joining 2
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03450 Non-homologous end-joining 2
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03440 Homologous recombination 2
ghi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 4
gma03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo03083 Polycomb repressive complex 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 3
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834820 103827626 103853833 106410296 106401193 106400843 107890019 107891828 107887494 102609699 100775397 100816692 100797921 100855126 7463647 7482634 25494325 11408726 101266989 102584418 107786305 9268318 103631385 103638287 123156959 123164575 123150214 123409326 8055822 100826424
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