ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-e.2	AT5G52840	NADH-ubiquinone oxidoreductase-like protein
ath-u.5	AT5G52840	NADH-ubiquinone oxidoreductase-like protein
ath-r.7	AT5G52840	NADH-ubiquinone oxidoreductase-like protein
ath-m.9	AT5G52840	NADH-ubiquinone oxidoreductase-like protein
ath-m.4.bio	AT5G52840	NADH-ubiquinone oxidoreductase-like protein
ath-m.4.hor	AT5G52840	NADH-ubiquinone oxidoreductase-like protein
ath-m.4.lig	AT5G52840	NADH-ubiquinone oxidoreductase-like protein
ath-m.4.str	AT5G52840	NADH-ubiquinone oxidoreductase-like protein
ath-m.4.tis	AT5G52840	NADH-ubiquinone oxidoreductase-like protein
bra-r.6	103844760	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
bra-r.6	103857112	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
bna-r.1	106441116	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
bna-r.1	106437555	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
bna-r.1	125579137	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
ghi-r.1	107904587	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
ghi-r.1	107923836	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
ghi-r.1	107942361	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
cit-r.1	102623795	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
gma-u.5	100526984	uncharacterized LOC100526984
vvi-u.5	100249252	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
ppo-u.5	7468351	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
ppo-u.5	18106445	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
mtr-u.5	25496515	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
sly-u.5	101258660	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
sot-r.1	102599771	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
sot-r.1	102579808	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
nta-r.1	107819871	putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
nta-r.1	107804940	putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
osa-u.5	4332639	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
zma-u.5	100280838	NADH-ubiquinone oxidoreductase 13 kDa-B subunit
zma-u.5	100285005	NADH-ubiquinone oxidoreductase 13 kDa-B subunit
tae-r.2	123085685	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
tae-r.2	123092318	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
tae-r.2	123097656	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
hvu-r.1	123448806	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
sbi-r.1	8083716	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
bdi-r.1	100827411	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
cre-r.1	CHLRE_13g568800v5	uncharacterized protein

Top 50 coexpressed genes to AT5G52840 (ath-e.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT5G52840 (ath-e.2 coexpression data)

CoexMap"835361"

[Cytoscape]

Annotation

functional annotation

KEGG

ath00190 [list] [network] Oxidative phosphorylation (170 genes)

GO BP

GO:0022904 [list] [network] respiratory electron transport chain	(28 genes)	IEA
GO:0009853 [list] [network] photorespiration	(38 genes)	TAS

GO CC

GO:0045271 [list] [network] respiratory chain complex I	(58 genes)	HDA IDA
GO:0031966 [list] [network] mitochondrial membrane	(105 genes)	IDA
GO:0005739 [list] [network] mitochondrion	(4244 genes)	HDA IDA ISM
GO:0009536 [list] [network] plastid	(5443 genes)	HDA

GO MF

Protein

NP_001331161.1 [sequence] [blastp]
NP_568778.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, chlo_mito 3, cyto_nucl 2, nucl 1, cyto 1, mito 1	(predict for NP_001331161.1)
chlo 4, chlo_mito 4, mito 2, cyto 1, plas 1, cyto_plas 1	(predict for NP_568778.1)

Subcellular
localization
TargetP

mito 7	(predict for NP_001331161.1)
mito 8	(predict for NP_568778.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-e.2 for AT5G52840	ath-u.5 for AT5G52840	ath-r.7 for AT5G52840	ath-m.9 for AT5G52840	ath-m.4.bio for AT5G52840	ath-m.4.hor for AT5G52840	ath-m.4.lig for AT5G52840	ath-m.4.str for AT5G52840	ath-m.4.tis for AT5G52840	bra-r.6 for 103844760	bra-r.6 for 103857112	bna-r.1 for 106441116	bna-r.1 for 106437555	bna-r.1 for 125579137	ghi-r.1 for 107904587	ghi-r.1 for 107923836	ghi-r.1 for 107942361	cit-r.1 for 102623795	gma-u.5 for 100526984	vvi-u.5 for 100249252	ppo-u.5 for 7468351	ppo-u.5 for 18106445	mtr-u.5 for 25496515	sly-u.5 for 101258660	sot-r.1 for 102599771	sot-r.1 for 102579808	nta-r.1 for 107819871	nta-r.1 for 107804940	osa-u.5 for 4332639	zma-u.5 for 100280838	zma-u.5 for 100285005	tae-r.2 for 123085685	tae-r.2 for 123092318	tae-r.2 for 123097656	hvu-r.1 for 123448806	sbi-r.1 for 8083716	bdi-r.1 for 100827411	cre-r.1 for CHLRE_13g568800v5

Ortholog

Ortholog ID: 5355

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

NADH-ubiquinone oxidoreductase-like protein

probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial

uncharacterized LOC100526984

probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial

putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial

probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial

NADH-ubiquinone oxidoreductase 13 kDa-B subunit

probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	8
bra04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	9
bra03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	5
ghi00260	Glycine, serine and threonine metabolism	2
ghi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	6
ghi01230	Biosynthesis of amino acids	4
ghi00330	Arginine and proline metabolism	2
ghi00340	Histidine metabolism	2
ghi00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	5
ghi00260	Glycine, serine and threonine metabolism	2
ghi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	7
cit03050	Proteasome	4
cit01200	Carbon metabolism	2
cit01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	2
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	4
vvi00190	Oxidative phosphorylation	3
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	8
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	6
sot04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	6
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	8
nta00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	11
tae00350	Tyrosine metabolism	2
tae00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	10
sbi00010	Glycolysis / Gluconeogenesis	2
sbi00020	Citrate cycle (TCA cycle)	2
sbi00620	Pyruvate metabolism	2
sbi00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	7

Expression

Expression pattern

Entrez Gene ID^*

835361

103844760

103857112

106385259

106390849

106391612

107904587

107923836

121224383

102623795

100526984

100249252

7468351

18106445

25496515

101258660

102599771

102579808

107819871

107804940

4332639

100280838

100285005

123085685

123092318

123097656

123448806

8083716

100827411

5719097

The preparation time of this page was 0.2 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	9	2	3	3	1	1	1	2	1	1	2	2	1	2	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G52840 (ath-e.2 coexpression data)

Top 50 enrichment test to AT5G52840 (ath-e.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**