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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   AT5G52960   tRNA dimethylallyltransferase 
 ath-u.5   AT5G52960   tRNA dimethylallyltransferase 
 ath-r.7   AT5G52960   tRNA dimethylallyltransferase 
 ath-m.9   AT5G52960   tRNA dimethylallyltransferase 
 ath-m.4.bio   AT5G52960   tRNA dimethylallyltransferase 
 ath-m.4.hor   AT5G52960   tRNA dimethylallyltransferase 
 ath-m.4.lig   AT5G52960   tRNA dimethylallyltransferase 
 ath-m.4.str   AT5G52960   tRNA dimethylallyltransferase 
 ath-m.4.tis   AT5G52960   tRNA dimethylallyltransferase 
 bra-r.6   103844776   uncharacterized LOC103844776 
 bna-r.1   106430538   uncharacterized LOC106430538 
 bna-r.1   BNAC09G29030D   uncharacterized BNAC09G29030D 
 ghi-r.1   107912809   uncharacterized LOC107912809 
 ghi-r.1   107912641   uncharacterized LOC107912641 
 cit-r.1   102616940   hypothetical protein 
 gma-u.5   100814763   uncharacterized LOC100814763 
 gma-u.5   100801986   uncharacterized LOC100801986 
 vvi-u.5   100241531   uncharacterized LOC100241531 
 ppo-u.5   7489800   uncharacterized LOC7489800 
 mtr-u.5   25496022   uncharacterized LOC25496022 
 sly-u.5   101256845   uncharacterized LOC101256845 
 sot-r.1   102595002   uncharacterized LOC102595002 
 nta-r.1   107760635   uncharacterized LOC107760635 
 nta-r.1   107770620   uncharacterized LOC107770620 
 osa-u.5   4339652   uncharacterized LOC4339652 
 zma-u.5   100277162   DUF3143 family protein 
 tae-r.2   123183193   uncharacterized LOC123183193 
 tae-r.2   123147268   uncharacterized LOC123147268 
 tae-r.2   123069035   uncharacterized LOC123069035 
 hvu-r.1   123451034   uncharacterized LOC123451034 
 sbi-r.1   8074617   uncharacterized LOC8074617 
 bdi-r.1   100835838   uncharacterized LOC100835838 

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Top 50 coexpressed genes to AT5G52960 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G52960 (ath-e.2 coexpression data)

CoexMap"835373"


athAT5G52960 | Entrez gene ID : 835373      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009532 [list] [network] plastid stroma  (704 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_200108.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 1  (predict for NP_200108.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_200108.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
AT5G52960
ath-u.5
for
AT5G52960
ath-r.7
for
AT5G52960
ath-m.9
for
AT5G52960
ath-m.4.bio
for
AT5G52960
ath-m.4.hor
for
AT5G52960
ath-m.4.lig
for
AT5G52960
ath-m.4.str
for
AT5G52960
ath-m.4.tis
for
AT5G52960
bra-r.6
for
103844776
bna-r.1
for
106430538
bna-r.1
for
BNAC09G29030D
ghi-r.1
for
107912809
ghi-r.1
for
107912641
cit-r.1
for
102616940
gma-u.5
for
100814763
gma-u.5
for
100801986
vvi-u.5
for
100241531
ppo-u.5
for
7489800
mtr-u.5
for
25496022
sly-u.5
for
101256845
sot-r.1
for
102595002
nta-r.1
for
107760635
nta-r.1
for
107770620
osa-u.5
for
4339652
zma-u.5
for
100277162
tae-r.2
for
123183193
tae-r.2
for
123147268
tae-r.2
for
123069035
hvu-r.1
for
123451034
sbi-r.1
for
8074617
bdi-r.1
for
100835838


Ortholog ID: 10390
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT5G52960 LOC103844776 LOC106430538 BNAC09G29030D LOC107912809 LOC107912641 LOC102616940 LOC100814763 LOC100801986 LOC100241531 LOC7489800 LOC25496022 LOC101256845 LOC102595002 LOC107760635 LOC107770620 LOC4339652 LOC100277162 LOC123183193 LOC123147268 LOC123069035 LOC123451034 LOC8074617 LOC100835838
Function* tRNA dimethylallyltransferase uncharacterized LOC103844776 uncharacterized LOC106430538 uncharacterized BNAC09G29030D uncharacterized LOC107912809 uncharacterized LOC107912641 hypothetical protein uncharacterized LOC100814763 uncharacterized LOC100801986 uncharacterized LOC100241531 uncharacterized LOC7489800 uncharacterized LOC25496022 uncharacterized LOC101256845 uncharacterized LOC102595002 uncharacterized LOC107760635 uncharacterized LOC107770620 uncharacterized LOC4339652 DUF3143 family protein uncharacterized LOC123183193 uncharacterized LOC123147268 uncharacterized LOC123069035 uncharacterized LOC123451034 uncharacterized LOC8074617 uncharacterized LOC100835838
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
bna00760 Nicotinate and nicotinamide metabolism 2
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00760 Nicotinate and nicotinamide metabolism 2
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00030 Pentose phosphate pathway 2
nta00230 Purine metabolism 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 6
osa01210 2-Oxocarboxylic acid metabolism 4
osa00640 Propanoate metabolism 3
osa00785 Lipoic acid metabolism 3
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 5
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835373 103844776 106430538 106413313 107912809 107912641 102616940 100814763 100801986 100241531 7489800 25496022 101256845 102595002 107760635 107770620 4339652 100277162 123183193 123147268 123069035 123451034 8074617 100835838
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