ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-e.2	AT5G61820	stress up-regulated Nod 19 protein
ath-u.5	AT5G61820	stress up-regulated Nod 19 protein
ath-r.7	AT5G61820	stress up-regulated Nod 19 protein
ath-m.9	AT5G61820	stress up-regulated Nod 19 protein
ath-m.4.bio	AT5G61820	stress up-regulated Nod 19 protein
ath-m.4.hor	AT5G61820	stress up-regulated Nod 19 protein
ath-m.4.lig	AT5G61820	stress up-regulated Nod 19 protein
ath-m.4.str	AT5G61820	stress up-regulated Nod 19 protein
ath-m.4.tis	AT5G61820	stress up-regulated Nod 19 protein
bra-r.6	103873465	uncharacterized LOC103873465
bra-r.6	103854962	uncharacterized LOC103854962
bna-r.1	106431703	uncharacterized LOC106431703
bna-r.1	106382751	uncharacterized LOC106382751
bna-r.1	106382752	uncharacterized LOC106382752
ghi-r.1	107937999	uncharacterized LOC107937999
ghi-r.1	107953593	uncharacterized LOC107953593
ghi-r.1	107946895	uncharacterized LOC107946895
cit-r.1	102618549	uncharacterized LOC102618549
gma-u.5	100803184	uncharacterized LOC100803184
gma-u.5	100784767	uncharacterized LOC100784767
gma-u.5	100815629	uncharacterized LOC100815629
vvi-u.5	100243857	uncharacterized LOC100243857
ppo-u.5	7457588	uncharacterized LOC7457588
mtr-u.5	11422023	uncharacterized LOC11422023
mtr-u.5	11426608	uncharacterized LOC11426608
sly-u.5	101252852	uncharacterized LOC101252852
sot-r.1	107060417	uncharacterized LOC107060417
sot-r.1	102591330	uncharacterized LOC102591330
sot-r.1	102590754	uncharacterized LOC102590754
nta-r.1	107802436	uncharacterized LOC107802436
nta-r.1	107816672	uncharacterized LOC107816672
nta-r.1	107812854	uncharacterized LOC107812854
osa-u.5	4346175	uncharacterized LOC4346175
zma-u.5	100281705	uncharacterized LOC100281705
tae-r.2	123156339	uncharacterized LOC123156339
tae-r.2	123152047	uncharacterized LOC123152047
tae-r.2	123165292	uncharacterized LOC123165292
hvu-r.1	123410772	uncharacterized LOC123410772
sbi-r.1	8060925	uncharacterized LOC8060925
bdi-r.1	100825330	uncharacterized LOC100825330
bdi-r.1	100825842	uncharacterized LOC100825842

Top 50 coexpressed genes to AT5G61820 (ath-e.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT5G61820 (ath-e.2 coexpression data)

CoexMap"836304"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0000325 [list] [network] plant-type vacuole	(788 genes)	HDA
GO:0005886 [list] [network] plasma membrane	(2598 genes)	IDA
GO:0009507 [list] [network] chloroplast	(5014 genes)	ISM

GO MF

GO:0005515 [list] [network] protein binding

(5363 genes)

IPI

Protein

NP_001330390.1 [sequence] [blastp]
NP_200990.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, vacu 4, extr 1, mito 1, E.R. 1	(predict for NP_001330390.1)
chlo 4, vacu 4, extr 1, mito 1, E.R. 1	(predict for NP_200990.2)

Subcellular
localization
TargetP

scret 9	(predict for NP_001330390.1)
scret 9	(predict for NP_200990.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-e.2 for AT5G61820	ath-u.5 for AT5G61820	ath-r.7 for AT5G61820	ath-m.9 for AT5G61820	ath-m.4.bio for AT5G61820	ath-m.4.hor for AT5G61820	ath-m.4.lig for AT5G61820	ath-m.4.str for AT5G61820	ath-m.4.tis for AT5G61820	bra-r.6 for 103873465	bra-r.6 for 103854962	bna-r.1 for 106431703	bna-r.1 for 106382751	bna-r.1 for 106382752	ghi-r.1 for 107937999	ghi-r.1 for 107953593	ghi-r.1 for 107946895	cit-r.1 for 102618549	gma-u.5 for 100803184	gma-u.5 for 100784767	gma-u.5 for 100815629	vvi-u.5 for 100243857	ppo-u.5 for 7457588	mtr-u.5 for 11422023	mtr-u.5 for 11426608	sly-u.5 for 101252852	sot-r.1 for 107060417	sot-r.1 for 102591330	sot-r.1 for 102590754	nta-r.1 for 107802436	nta-r.1 for 107816672	nta-r.1 for 107812854	osa-u.5 for 4346175	zma-u.5 for 100281705	tae-r.2 for 123156339	tae-r.2 for 123152047	tae-r.2 for 123165292	hvu-r.1 for 123410772	sbi-r.1 for 8060925	bdi-r.1 for 100825330	bdi-r.1 for 100825842

Ortholog

Ortholog ID: 2514

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

stress up-regulated Nod 19 protein

uncharacterized LOC103873465

uncharacterized LOC103854962

uncharacterized LOC106382751

uncharacterized LOC106382752

uncharacterized LOC106421954

uncharacterized LOC107946895

uncharacterized LOC107946626

uncharacterized LOC107946625

uncharacterized LOC102618549

uncharacterized LOC100803184

uncharacterized LOC100815629

uncharacterized LOC100785991

uncharacterized LOC100243857

uncharacterized LOC18105872

uncharacterized LOC18105874

uncharacterized LOC11422023

uncharacterized LOC11426608

uncharacterized LOC25480199

uncharacterized LOC101252852

uncharacterized LOC102591330

uncharacterized LOC102590754

uncharacterized LOC102603832

uncharacterized LOC107802436

uncharacterized LOC107816672

uncharacterized LOC107812854

uncharacterized LOC4346175

uncharacterized LOC100281705

uncharacterized LOC123165292

uncharacterized LOC123410772

uncharacterized LOC8060925

uncharacterized LOC100825330

uncharacterized LOC100825842

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04146	Peroxisome	2
bra00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00999	Biosynthesis of various plant secondary metabolites	3
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00999	Biosynthesis of various plant secondary metabolites	3
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	4
ghi01250	Biosynthesis of nucleotide sugars	4
ghi00999	Biosynthesis of various plant secondary metabolites	3
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00280	Valine, leucine and isoleucine degradation	2
gma00650	Butanoate metabolism	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00480	Glutathione metabolism	2
gma00943	Isoflavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00480	Glutathione metabolism	2
ppo00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00480	Glutathione metabolism	2
ppo00940	Phenylpropanoid biosynthesis	2
ppo02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	4
sot00071	Fatty acid degradation	3
sot00592	alpha-Linolenic acid metabolism	3
sot01212	Fatty acid metabolism	3
sot01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	4
sot00071	Fatty acid degradation	3
sot00592	alpha-Linolenic acid metabolism	3
sot01212	Fatty acid metabolism	3
sot01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00460	Cyanoamino acid metabolism	3
osa01200	Carbon metabolism	2
osa01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	6
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00460	Cyanoamino acid metabolism	3
tae00500	Starch and sucrose metabolism	3
tae00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00061	Fatty acid biosynthesis	2
hvu01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00052	Galactose metabolism	3
sbi00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00010	Glycolysis / Gluconeogenesis	3
bdi01200	Carbon metabolism	3
bdi01230	Biosynthesis of amino acids	3
bdi00030	Pentose phosphate pathway	2
bdi00051	Fructose and mannose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

836304

103873465

103854962

106382751

106382752

106421954

107946895

107946626

107946625

102618549

100803184

100815629

100785991

100243857

18105872

18105874

11422023

11426608

25480199

101252852

102591330

102590754

102603832

107802436

107816672

107812854

4346175

100281705

123165292

123410772

8060925

100825330

100825842

The preparation time of this page was 0.4 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	9	2	3	3	1	3	1	1	2	1	3	3	1	1	3	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G61820 (ath-e.2 coexpression data)

Top 50 enrichment test to AT5G61820 (ath-e.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**