ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-e.2	AT1G07160	Protein phosphatase 2C family protein
ath-u.5	AT1G07160	Protein phosphatase 2C family protein
ath-r.7	AT1G07160	Protein phosphatase 2C family protein
ath-m.9	AT1G07160	Protein phosphatase 2C family protein
ath-m.4.bio	AT1G07160	Protein phosphatase 2C family protein
ath-m.4.hor	AT1G07160	Protein phosphatase 2C family protein
ath-m.4.lig	AT1G07160	Protein phosphatase 2C family protein
ath-m.4.str	AT1G07160	Protein phosphatase 2C family protein
ath-m.4.tis	AT1G07160	Protein phosphatase 2C family protein
ath-u.5	AT2G30020	Protein phosphatase 2C family protein
ath-u.5	PP2C5	phosphatase 2C5
bra-r.6	103857285	probable protein phosphatase 2C 25
bna-r.1	106399674	probable protein phosphatase 2C 30
ghi-r.1	107906278	probable protein phosphatase 2C 25
ghi-r.1	107927017	probable protein phosphatase 2C 25
ghi-r.1	107931761	probable protein phosphatase 2C 25
cit-r.1	102628871	probable protein phosphatase 2C 25
cit-r.1	102625197	probable protein phosphatase 2C 2
gma-u.5	100795728	probable protein phosphatase 2C 25
vvi-u.5	100248525	probable protein phosphatase 2C 25
vvi-u.5	100246740	probable protein phosphatase 2C 25
ppo-u.5	7494509	probable protein phosphatase 2C 2
ppo-u.5	7454857	probable protein phosphatase 2C 25
ppo-u.5	7487810	probable protein phosphatase 2C 25
mtr-u.5	11426315	probable protein phosphatase 2C 2
mtr-u.5	25490928	probable protein phosphatase 2C 25
mtr-u.5	25490930	probable protein phosphatase 2C 25
sly-u.5	101256099	probable protein phosphatase 2C 25
sly-u.5	101258862	putative protein phosphatase 2C 53
sly-u.5	101267711	putative protein phosphatase 2C 53
sot-r.1	102581778	putative protein phosphatase 2C 53
sot-r.1	102591678	probable protein phosphatase 2C 25
sot-r.1	102599567	putative protein phosphatase 2C 53
nta-r.1	107793258	putative protein phosphatase 2C 25
nta-r.1	107824119	putative protein phosphatase 2C 25
nta-r.1	107815447	putative protein phosphatase 2C 53
osa-u.5	4332509	probable protein phosphatase 2C 32
zma-u.5	100383423	uncharacterized LOC100383423
zma-u.5	103639268	probable protein phosphatase 2C 32
tae-r.2	123092450	probable protein phosphatase 2C 32
tae-r.2	123097774	probable protein phosphatase 2C 32
tae-r.2	123085578	probable protein phosphatase 2C 32
hvu-r.1	123448909	probable protein phosphatase 2C 32
sbi-r.1	8081429	probable protein phosphatase 2C 32
bdi-r.1	100830459	probable protein phosphatase 2C 32

Top 50 coexpressed genes to AT1G07160 (ath-e.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT1G07160 (ath-e.2 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

Protein phosphatase 2C family protein

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(5014 genes)

ISM

GO MF

Protein

NP_172196.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for NP_172196.1)

Subcellular
localization
TargetP

chlo 9

(predict for NP_172196.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-e.2 for AT1G07160	ath-u.5 for AT1G07160	ath-r.7 for AT1G07160	ath-m.9 for AT1G07160	ath-m.4.bio for AT1G07160	ath-m.4.hor for AT1G07160	ath-m.4.lig for AT1G07160	ath-m.4.str for AT1G07160	ath-m.4.tis for AT1G07160	ath-u.5 for AT2G30020	ath-u.5 for PP2C5	bra-r.6 for 103857285	bna-r.1 for 106399674	ghi-r.1 for 107906278	ghi-r.1 for 107927017	ghi-r.1 for 107931761	cit-r.1 for 102628871	cit-r.1 for 102625197	gma-u.5 for 100795728	vvi-u.5 for 100248525	vvi-u.5 for 100246740	ppo-u.5 for 7494509	ppo-u.5 for 7454857	ppo-u.5 for 7487810	mtr-u.5 for 11426315	mtr-u.5 for 25490928	mtr-u.5 for 25490930	sly-u.5 for 101256099	sly-u.5 for 101258862	sly-u.5 for 101267711	sot-r.1 for 102581778	sot-r.1 for 102591678	sot-r.1 for 102599567	nta-r.1 for 107793258	nta-r.1 for 107824119	nta-r.1 for 107815447	osa-u.5 for 4332509	zma-u.5 for 100383423	zma-u.5 for 103639268	tae-r.2 for 123092450	tae-r.2 for 123097774	tae-r.2 for 123085578	hvu-r.1 for 123448909	sbi-r.1 for 8081429	bdi-r.1 for 100830459

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Ortholog

Ortholog ID: 1570

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

PP2C5

Function^*

Protein phosphatase 2C family protein

phosphatase 2C5

probable protein phosphatase 2C 30