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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   SNL6   paired amphipathic helix Sin3-like protein 
 ath-u.5   SNL6   paired amphipathic helix Sin3-like protein 
 ath-r.7   SNL6   paired amphipathic helix Sin3-like protein 
 bra-r.6   103871816   paired amphipathic helix protein Sin3-like 6 
 bna-r.1   106346192   paired amphipathic helix protein Sin3-like 6 
 bna-r.1   106350410   paired amphipathic helix protein Sin3-like 6 

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Top 50 coexpressed genes to SNL6 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SNL6 (ath-e.2 coexpression data)

CoexMap"837584"


athSNL6 | Entrez gene ID : 837584      
Species ath bra bna cre vvi ppo mtr hvu tae osa gma zma sly ghi cit sbi nta bdi sot
Paralog 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0070822 [list] [network] Sin3-type complex  (8 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001321764.1 [sequence] [blastp]
NP_001321765.1 [sequence] [blastp]
NP_172515.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cysk 1  (predict for NP_001321764.1)
chlo 5,  nucl 4  (predict for NP_001321765.1)
nucl 6,  chlo 1,  cysk 1  (predict for NP_172515.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001321764.1)
mito 3,  scret 3  (predict for NP_001321765.1)
other 8  (predict for NP_172515.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
SNL6
ath-u.5
for
SNL6
ath-r.7
for
SNL6
bra-r.6
for
103871816
bna-r.1
for
106346192
bna-r.1
for
106350410


Ortholog ID: 20803
Species ath bra bna bna
Symbol SNL6 LOC103871816 LOC106346192 LOC106350410
Function* paired amphipathic helix Sin3-like protein paired amphipathic helix protein Sin3-like 6 paired amphipathic helix protein Sin3-like 6 paired amphipathic helix protein Sin3-like 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 Nucleocytoplasmic transport 3
ath03008 Ribosome biogenesis in eukaryotes 3
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837584 103871816 106346192 106350410
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