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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   NOF1   U3 small nucleolar RNA-associated protein 
 ath-u.5   NOF1   U3 small nucleolar RNA-associated protein 
 ath-r.7   NOF1   U3 small nucleolar RNA-associated protein 
 ath-m.9   NOF1   U3 small nucleolar RNA-associated protein 
 ath-m.4.bio   NOF1   U3 small nucleolar RNA-associated protein 
 ath-m.4.hor   NOF1   U3 small nucleolar RNA-associated protein 
 ath-m.4.lig   NOF1   U3 small nucleolar RNA-associated protein 
 ath-m.4.str   NOF1   U3 small nucleolar RNA-associated protein 
 ath-m.4.tis   NOF1   U3 small nucleolar RNA-associated protein 
 bra-r.6   103835946   U3 small nucleolar RNA-associated protein 25 
 bna-r.1   106358581   U3 small nucleolar RNA-associated protein 25 
 bna-r.1   106391535   U3 small nucleolar RNA-associated protein 25-like 
 ghi-r.1   107907358   digestive organ expansion factor homolog 
 ghi-r.1   107907503   digestive organ expansion factor homolog 
 cit-r.1   102618633   protein NUCLEOLAR FACTOR 1 
 gma-u.5   100810500   U3 small nucleolar RNA-associated protein 25 
 gma-u.5   100779633   U3 small nucleolar RNA-associated protein 25 
 vvi-u.5   100254023   protein NUCLEOLAR FACTOR 1 
 ppo-u.5   18111188   protein NUCLEOLAR FACTOR 1 
 mtr-u.5   25502655   U3 small nucleolar RNA-associated protein 25 
 mtr-u.5   11436387   U3 small nucleolar RNA-associated protein 25 
 mtr-u.5   11444888   U3 small nucleolar RNA-associated protein 25 
 sly-u.5   101246643   protein NUCLEOLAR FACTOR 1 
 sot-r.1   102593618   U3 small nucleolar RNA-associated protein 25 
 nta-r.1   107821000   protein NUCLEOLAR FACTOR 1 
 nta-r.1   107815595   protein NUCLEOLAR FACTOR 1 
 osa-u.5   4338320   protein NUCLEOLAR FACTOR 1 
 zma-u.5   103640742   U3 small nucleolar RNA-associated protein 25 
 tae-r.2   123087747   U3 small nucleolar RNA-associated protein 25 
 tae-r.2   123123676   U3 small nucleolar RNA-associated protein 25 
 tae-r.2   123114190   U3 small nucleolar RNA-associated protein 25 
 hvu-r.1   123394955   U3 small nucleolar RNA-associated protein 25 
 sbi-r.1   8074871   U3 small nucleolar RNA-associated protein 25 
 bdi-r.1   100831526   U3 small nucleolar RNA-associated protein 25 
 cre-r.1   CHLRE_04g218300v5   uncharacterized protein 

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Top 50 coexpressed genes to NOF1 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to NOF1 (ath-e.2 coexpression data)

CoexMap"838345"


athNOF1 | Entrez gene ID : 838345      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 3 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009303 [list] [network] rRNA transcription  (7 genes)  IMP  
GO:0009553 [list] [network] embryo sac development  (161 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO CC
GO:0005730 [list] [network] nucleolus  (394 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0034511 [list] [network] U3 snoRNA binding  (1 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_564032.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1,  mito 1,  plas 1,  cysk 1,  cysk_plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_564032.1)
Subcellular
localization
TargetP
other 8  (predict for NP_564032.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
NOF1
ath-u.5
for
NOF1
ath-r.7
for
NOF1
ath-m.9
for
NOF1
ath-m.4.bio
for
NOF1
ath-m.4.hor
for
NOF1
ath-m.4.lig
for
NOF1
ath-m.4.str
for
NOF1
ath-m.4.tis
for
NOF1
bra-r.6
for
103835946
bna-r.1
for
106358581
bna-r.1
for
106391535
ghi-r.1
for
107907358
ghi-r.1
for
107907503
cit-r.1
for
102618633
gma-u.5
for
100810500
gma-u.5
for
100779633
vvi-u.5
for
100254023
ppo-u.5
for
18111188
mtr-u.5
for
25502655
mtr-u.5
for
11436387
mtr-u.5
for
11444888
sly-u.5
for
101246643
sot-r.1
for
102593618
nta-r.1
for
107821000
nta-r.1
for
107815595
osa-u.5
for
4338320
zma-u.5
for
103640742
tae-r.2
for
123087747
tae-r.2
for
123123676
tae-r.2
for
123114190
hvu-r.1
for
123394955
sbi-r.1
for
8074871
bdi-r.1
for
100831526
cre-r.1
for
CHLRE_04g218300v5


Ortholog ID: 8700
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol NOF1 LOC103835946 LOC106358581 LOC106391535 LOC107907358 LOC107907503 LOC102618633 LOC100810500 LOC100779633 LOC100254023 LOC18111188 LOC11436387 LOC11444888 LOC25494395 LOC101246643 LOC102593618 LOC107821000 LOC107815595 LOC4338320 LOC103640742 LOC123087747 LOC123123676 LOC123114190 LOC123394955 LOC8074871 LOC100831526 CHLRE_04g218300v5
Function* U3 small nucleolar RNA-associated protein U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25-like digestive organ expansion factor homolog digestive organ expansion factor homolog protein NUCLEOLAR FACTOR 1 U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25 protein NUCLEOLAR FACTOR 1 protein NUCLEOLAR FACTOR 1 U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25 uncharacterized LOC25494395 protein NUCLEOLAR FACTOR 1 U3 small nucleolar RNA-associated protein 25 protein NUCLEOLAR FACTOR 1 protein NUCLEOLAR FACTOR 1 protein NUCLEOLAR FACTOR 1 U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma03013 Nucleocytoplasmic transport 4
gma03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr03022 Basal transcription factors 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838345 103835946 106358581 106391535 107907358 107907503 102618633 100810500 100779633 100254023 18111188 11436387 11444888 25494395 101246643 102593618 107821000 107815595 4338320 103640742 123087747 123123676 123114190 123394955 8074871 100831526 5717837
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