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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   AT1G60990   Glycine cleavage T-protein family 
 ath-u.5   AT1G60990   Glycine cleavage T-protein family 
 ath-r.7   AT1G60990   Glycine cleavage T-protein family 
 ath-m.9   AT1G60990   Glycine cleavage T-protein family 
 ath-m.4.bio   AT1G60990   Glycine cleavage T-protein family 
 ath-m.4.hor   AT1G60990   Glycine cleavage T-protein family 
 ath-m.4.lig   AT1G60990   Glycine cleavage T-protein family 
 ath-m.4.str   AT1G60990   Glycine cleavage T-protein family 
 ath-m.4.tis   AT1G60990   Glycine cleavage T-protein family 
 bra-r.6   103830248   putative transferase At1g60990, chloroplastic 
 bna-r.1   111197955   putative transferase At1g60990, chloroplastic 
 bna-r.1   125576346   putative transferase At1g60990, chloroplastic 
 ghi-r.1   107927812   putative transferase At1g60990, chloroplastic 
 ghi-r.1   107908769   putative transferase At1g60990, chloroplastic 
 cit-r.1   102619177   putative transferase At1g60990, chloroplastic 
 gma-u.5   100814706   putative transferase At1g60990, chloroplastic 
 vvi-u.5   100263404   putative transferase At1g60990, chloroplastic 
 mtr-u.5   11415887   putative transferase At1g60990, chloroplastic 
 sly-u.5   101252630   putative transferase At1g60990, chloroplastic 
 sot-r.1   102605971   putative transferase At1g60990, chloroplastic 
 nta-r.1   107799563   putative transferase At1g60990, chloroplastic 
 nta-r.1   107827255   putative transferase At1g60990, chloroplastic 
 cre-r.1   CHLRE_12g552850v5   uncharacterized protein 

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Top 50 coexpressed genes to AT1G60990 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G60990 (ath-e.2 coexpression data)

CoexMap"842391"


athAT1G60990 | Entrez gene ID : 842391      
Species ath bra bna ghi cit gma vvi mtr sly sot nta cre ppo hvu tae bdi osa zma sbi
Paralog 9 1 2 2 1 1 1 1 1 1 2 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016226 [list] [network] iron-sulfur cluster assembly  (26 genes)  IGI  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA  
GO MF
Protein NP_001077748.1 [sequence] [blastp]
NP_001117522.1 [sequence] [blastp]
NP_176295.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1  (predict for NP_001077748.1)
nucl 6,  cyto 2,  chlo 1  (predict for NP_001117522.1)
nucl 6,  cyto 2,  chlo 1  (predict for NP_176295.3)
Subcellular
localization
TargetP
other 2  (predict for NP_001077748.1)
other 2  (predict for NP_001117522.1)
other 2  (predict for NP_176295.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
AT1G60990
ath-u.5
for
AT1G60990
ath-r.7
for
AT1G60990
ath-m.9
for
AT1G60990
ath-m.4.bio
for
AT1G60990
ath-m.4.hor
for
AT1G60990
ath-m.4.lig
for
AT1G60990
ath-m.4.str
for
AT1G60990
ath-m.4.tis
for
AT1G60990
bra-r.6
for
103830248
bna-r.1
for
111197955
bna-r.1
for
125576346
ghi-r.1
for
107927812
ghi-r.1
for
107908769
cit-r.1
for
102619177
gma-u.5
for
100814706
vvi-u.5
for
100263404
mtr-u.5
for
11415887
sly-u.5
for
101252630
sot-r.1
for
102605971
nta-r.1
for
107799563
nta-r.1
for
107827255
cre-r.1
for
CHLRE_12g552850v5


Ortholog ID: 13485
Species ath bra bna bna ghi ghi cit gma vvi mtr sly sot nta nta cre
Symbol AT1G60990 LOC103830248 LOC111197955 LOC125576346 LOC107927812 LOC107908769 LOC102619177 LOC100814706 LOC100263404 LOC11415887 LOC101252630 LOC102605971 LOC107799563 LOC107827255 CHLRE_12g552850v5
Function* Glycine cleavage T-protein family putative transferase At1g60990, chloroplastic putative transferase At1g60990, chloroplastic putative transferase At1g60990, chloroplastic putative transferase At1g60990, chloroplastic putative transferase At1g60990, chloroplastic putative transferase At1g60990, chloroplastic putative transferase At1g60990, chloroplastic putative transferase At1g60990, chloroplastic putative transferase At1g60990, chloroplastic putative transferase At1g60990, chloroplastic putative transferase At1g60990, chloroplastic putative transferase At1g60990, chloroplastic putative transferase At1g60990, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 4
bra03010 Ribosome 4
bra00860 Porphyrin metabolism 3
bra03060 Protein export 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna04141 Protein processing in endoplasmic reticulum 6
bna04144 Endocytosis 6
bna04626 Plant-pathogen interaction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 3
ghi03060 Protein export 2
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 3
ghi03060 Protein export 2
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842391 103830248 111197955 125576346 107927812 107908769 102619177 100814706 100263404 11415887 101252630 102605971 107799563 107827255 5719693
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