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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   AT1G62820   Calcium-binding EF-hand family protein 
 ath-u.5   AT1G62820   Calcium-binding EF-hand family protein 
 ath-r.7   AT1G62820   Calcium-binding EF-hand family protein 
 ath-m.9   AT1G62820   Calcium-binding EF-hand family protein 
 ath-m.4.bio   AT1G62820   Calcium-binding EF-hand family protein 
 ath-m.4.hor   AT1G62820   Calcium-binding EF-hand family protein 
 ath-m.4.lig   AT1G62820   Calcium-binding EF-hand family protein 
 ath-m.4.str   AT1G62820   Calcium-binding EF-hand family protein 
 ath-m.4.tis   AT1G62820   Calcium-binding EF-hand family protein 
 bra-r.6   103843136   probable calcium-binding protein CML13 
 bra-r.6   103872016   probable calcium-binding protein CML13 
 bra-r.6   103836172   probable calcium-binding protein CML13 
 bna-r.1   106401919   probable calcium-binding protein CML13 
 bna-r.1   106411942   probable calcium-binding protein CML13 
 bna-r.1   106382396   probable calcium-binding protein CML13 
 ghi-r.1   107946953   probable calcium-binding protein CML13 
 ghi-r.1   107943447   probable calcium-binding protein CML13 
 cit-r.1   102629574   probable calcium-binding protein CML13 
 gma-u.5   100527568   putative calcium-binding protein 
 gma-u.5   100500081   calcium-binding EF-hand family protein 
 vvi-u.5   100232874   serine/threonine kinase-like 
 ppo-u.5   18094401   probable calcium-binding protein CML13 
 ppo-u.5   7465803   probable calcium-binding protein CML13 
 mtr-u.5   11429162   probable calcium-binding protein CML13 
 sly-u.5   101251558   probable calcium-binding protein CML13 
 sly-u.5   101244743   probable calcium-binding protein CML13 
 sot-r.1   102595378   probable calcium-binding protein CML13 
 sot-r.1   102581843   probable calcium-binding protein CML13 
 nta-r.1   107816741   putative calcium-binding protein CML13 
 osa-u.5   4344525   probable calcium-binding protein CML7 
 zma-u.5   100282202   Calmodulin 
 zma-u.5   100272455   calmodulin 
 tae-r.2   123155717   probable calcium-binding protein CML7 
 sbi-r.1   8068579   probable calcium-binding protein CML7 
 bdi-r.1   100840235   probable calcium-binding protein CML7 

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Top 50 coexpressed genes to AT1G62820 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G62820 (ath-e.2 coexpression data)

CoexMap"842581"


athAT1G62820 | Entrez gene ID : 842581      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae sbi bdi hvu cre
Paralog 9 3 3 2 1 2 1 2 1 2 2 1 1 2 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04626 [list] [network] Plant-pathogen interaction (216 genes)
GO BP
GO:0071548 [list] [network] response to dexamethasone  (5 genes)  IEP  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA ISM  
GO MF
Protein NP_176470.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  plas 3,  nucl_plas 3,  cyto 2  (predict for NP_176470.1)
Subcellular
localization
TargetP
other 8  (predict for NP_176470.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
AT1G62820
ath-u.5
for
AT1G62820
ath-r.7
for
AT1G62820
ath-m.9
for
AT1G62820
ath-m.4.bio
for
AT1G62820
ath-m.4.hor
for
AT1G62820
ath-m.4.lig
for
AT1G62820
ath-m.4.str
for
AT1G62820
ath-m.4.tis
for
AT1G62820
bra-r.6
for
103843136
bra-r.6
for
103872016
bra-r.6
for
103836172
bna-r.1
for
106401919
bna-r.1
for
106411942
bna-r.1
for
106382396
ghi-r.1
for
107946953
ghi-r.1
for
107943447
cit-r.1
for
102629574
gma-u.5
for
100527568
gma-u.5
for
100500081
vvi-u.5
for
100232874
ppo-u.5
for
18094401
ppo-u.5
for
7465803
mtr-u.5
for
11429162
sly-u.5
for
101251558
sly-u.5
for
101244743
sot-r.1
for
102595378
sot-r.1
for
102581843
nta-r.1
for
107816741
osa-u.5
for
4344525
zma-u.5
for
100282202
zma-u.5
for
100272455
tae-r.2
for
123155717
sbi-r.1
for
8068579
bdi-r.1
for
100840235


Ortholog ID: 7029
Species ath bra bra bra bna bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sly sot sot nta osa zma zma tae sbi bdi
Symbol AT1G62820 LOC103843136 LOC103872016 LOC103836172 LOC106376231 LOC111208752 LOC106445592 LOC107946953 LOC107943447 LOC102629574 LOC100527568 LOC100500081 LOC100232874 LOC18094401 LOC7465803 LOC11429162 LOC101251558 LOC101244743 LOC102595378 LOC102581843 LOC107816741 LOC4344525 LOC100282202 LOC100272455 LOC123155717 LOC8068579 LOC100840235
Function* Calcium-binding EF-hand family protein probable calcium-binding protein CML13 probable calcium-binding protein CML13 probable calcium-binding protein CML13 probable calcium-binding protein CML13 probable calcium-binding protein CML13 probable calcium-binding protein CML13 probable calcium-binding protein CML13 probable calcium-binding protein CML13 probable calcium-binding protein CML13 putative calcium-binding protein calcium-binding EF-hand family protein serine/threonine kinase-like probable calcium-binding protein CML13 probable calcium-binding protein CML13 probable calcium-binding protein CML13 probable calcium-binding protein CML13 probable calcium-binding protein CML13 probable calcium-binding protein CML13 probable calcium-binding protein CML13 putative calcium-binding protein CML13 probable calcium-binding protein CML7 Calmodulin calmodulin probable calcium-binding protein CML7 probable calcium-binding protein CML7 probable calcium-binding protein CML7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
ath04016 MAPK signaling pathway - plant 2
ath04070 Phosphatidylinositol signaling system 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 4
bra03050 Proteasome 3
bra04626 Plant-pathogen interaction 3
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 4
bra04130 SNARE interactions in vesicular transport 3
bra03083 Polycomb repressive complex 2
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra03083 Polycomb repressive complex 3
bra04141 Protein processing in endoplasmic reticulum 3
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 6
ghi01250 Biosynthesis of nucleotide sugars 3
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi03018 RNA degradation 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 6
ghi01250 Biosynthesis of nucleotide sugars 3
ghi04626 Plant-pathogen interaction 2
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04145 Phagosome 2
cit04517 IgSF CAM signaling 2
cit04814 Motor proteins 2
cit00240 Pyrimidine metabolism 2
cit01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
gma04120 Ubiquitin mediated proteolysis 4
gma00190 Oxidative phosphorylation 2
gma04145 Phagosome 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
vvi00510 N-Glycan biosynthesis 2
vvi00513 Various types of N-glycan biosynthesis 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 3
ppo04120 Ubiquitin mediated proteolysis 3
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00190 Oxidative phosphorylation 2
ppo04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
ppo04144 Endocytosis 3
ppo03013 Nucleocytoplasmic transport 2
ppo00270 Cysteine and methionine metabolism 2
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 4
mtr04144 Endocytosis 3
mtr04016 MAPK signaling pathway - plant 3
mtr04070 Phosphatidylinositol signaling system 3
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 5
sly00190 Oxidative phosphorylation 5
sly04142 Lysosome 5
sly04145 Phagosome 5
sly04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 6
sot04145 Phagosome 6
sot00190 Oxidative phosphorylation 5
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00020 Citrate cycle (TCA cycle) 2
sot00190 Oxidative phosphorylation 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00510 N-Glycan biosynthesis 2
osa00513 Various types of N-glycan biosynthesis 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
zma00510 N-Glycan biosynthesis 2
zma00513 Various types of N-glycan biosynthesis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
zma03410 Base excision repair 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01250 Biosynthesis of nucleotide sugars 3
bdi00051 Fructose and mannose metabolism 2
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842581 103843136 103872016 103836172 106376231 111208752 106445592 107946953 107943447 102629574 100527568 100500081 100232874 18094401 7465803 11429162 101251558 101244743 102595378 102581843 107816741 4344525 100282202 100272455 123155717 8068579 100840235
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