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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   psbM   photosystem II protein M 
 ath-u.5   psbM   photosystem II protein M 
 ath-r.7   psbM   photosystem II protein M 
 ghi-r.1   psbM   photosystem II protein M 
 cit-r.1   psbM   photosystem II protein M 
 gma-u.5   psbM   photosystem II protein M 
 vvi-u.5   psbM   photosystem II protein M 
 mtr-u.5   psbM   photosystem II protein M 
 sly-u.5   psbM   photosystem II protein M 
 sot-r.1   psbM   photosystem II protein M 
 nta-r.1   psbM   photosystem II protein M 
 osa-u.5   psbM   photosystem II protein M 
 zma-u.5   psbM   photosystem II protein M 
 hvu-r.1   psbM   photosystem II protein M 
 sbi-r.1   psbM   photosystem II protein M 
 bdi-r.1   psbM   photosystem II protein M 

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Top 50 coexpressed genes to psbM (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to psbM (ath-e.2 coexpression data)

CoexMap"844781"


athpsbM | Entrez gene ID : 844781    
Species ath ghi cit gma vvi mtr sly sot nta osa zma hvu sbi bdi cre bra ppo bna tae
Paralog 3 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00195 [list] [network] Photosynthesis (77 genes)
GO BP
GO CC
GO MF
Protein NP_051053.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 4,  plas 2,  E.R._vacu 2,  nucl 1,  mito_plas 1,  cyto_plas 1  (predict for NP_051053.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_051053.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
psbM
ath-u.5
for
psbM
ath-r.7
for
psbM
ghi-r.1
for
psbM
cit-r.1
for
psbM
gma-u.5
for
psbM
vvi-u.5
for
psbM
mtr-u.5
for
psbM
sly-u.5
for
psbM
sot-r.1
for
psbM
nta-r.1
for
psbM
osa-u.5
for
psbM
zma-u.5
for
psbM
hvu-r.1
for
psbM
sbi-r.1
for
psbM
bdi-r.1
for
psbM


Ortholog ID: 12061
Species ath ghi cit gma vvi mtr sly sot nta osa zma hvu sbi bdi
Symbol psbM psbM psbM psbM psbM psbM psbM psbM psbM psbM psbM psbM psbM psbM
Function* photosystem II protein M photosystem II protein M photosystem II protein M photosystem II protein M photosystem II protein M photosystem II protein M photosystem II protein M photosystem II protein M photosystem II protein M photosystem II protein M photosystem II protein M photosystem II protein M photosystem II protein M photosystem II protein M
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 9
ath00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 6
ghi03010 Ribosome 4
ghi00190 Oxidative phosphorylation 4
ghi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 5
cit00970 Aminoacyl-tRNA biosynthesis 5
cit03010 Ribosome 3
cit00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00195 Photosynthesis 5
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi00195 Photosynthesis 7
vvi00190 Oxidative phosphorylation 6
vvi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
mtr00195 Photosynthesis 6
mtr00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly00970 Aminoacyl-tRNA biosynthesis 6
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 8
sot03010 Ribosome 7
sot00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 9
nta00190 Oxidative phosphorylation 8
nta03010 Ribosome 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 9
osa03010 Ribosome 4
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 8
zma00190 Oxidative phosphorylation 6
zma03010 Ribosome 6
zma03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 8
sbi03010 Ribosome 5
sbi00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 4
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844781 3989200 4271238 3989288 4025102 5333153 3950485 4099956 800459 3131419 845210 4525090 4549129 6439785
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