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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G53650   Histone superfamily protein 
 ath-r.7   AT3G53650   Histone superfamily protein 
 ath-e.2   AT3G53650   Histone superfamily protein 
 ath-u.5   HTB1   Histone superfamily protein 
 ath-u.5   HTB4   Histone superfamily protein 
 bra-r.6   103829764   histone H2B.3 
 bra-r.6   103863386   histone H2B.8 
 bna-r.1   106346354   histone H2B.2-like 
 bna-r.1   106347524   histone H2B.7 
 bna-r.1   106352612   histone H2B.3 
 ghi-r.1   107889081   histone H2B-like 
 ghi-r.1   107889080   histone H2B-like 
 ghi-r.1   107963943   histone H2B-like 
 cit-r.1   102629049   histone H2B.3 
 cit-r.1   102624126   histone H2B.4 
 cit-r.1   127902174   histone H2B.3-like 
 gma-u.5   111828532   probable histone H2B 
 gma-u.5   100820177   probable histone H2B.1 
 gma-u.5   100817849   probable histone H2B.1 
 vvi-u.5   100263369   histone H2B.3 
 vvi-u.5   100258812   probable histone H2B.1 
 ppo-u.5   7468455   probable histone H2B.3 
 ppo-u.5   7469475   probable histone H2B.3 
 ppo-u.5   18101997   histone H2B 
 mtr-u.5   25492533   probable histone H2B.1 
 mtr-u.5   25485824   probable histone H2B.3 
 mtr-u.5   25492556   probable histone H2B.1 
 sly-u.5   101267024   histone H2B.3-like 
 sly-u.5   101264987   histone H2B 
 sly-u.5   101261496   histone H2B 
 sot-r.1   102582527   histone H2B.3-like 
 sot-r.1   102585268   histone H2B.3-like 
 sot-r.1   102585943   histone H2B-like 
 nta-r.1   107807323   histone H2B 
 nta-r.1   107815679   putative histone H2B.1 
 nta-r.1   107817295   histone H2B 
 osa-u.5   4324495   histone H2B.10 
 osa-u.5   4345904   histone H2B.2-like 
 osa-u.5   107278608   histone H2B.1 
 zma-u.5   100192792   Histone H2B 
 zma-u.5   100273745   Histone H2B 
 zma-u.5   100273491   histone H2B.4 
 tae-r.2   123102000   histone H2B.1-like 
 tae-r.2   123084871   histone H2B.1-like 
 tae-r.2   123045564   histone H2B.1-like 
 hvu-r.1   123440449   histone H2B.1-like 
 hvu-r.1   123440491   histone H2B.1-like 
 sbi-r.1   8055359   histone H2B.3 
 sbi-r.1   8061771   histone H2B.11 
 sbi-r.1   8084914   histone H2B.1 
 bdi-r.1   100846031   histone H2B.1 
 bdi-r.1   100823811   histone H2B.1 
 bdi-r.1   100841029   histone H2B.11 
 cre-r.1   CHLRE_06g264800v5   uncharacterized protein 
 cre-r.1   CHLRE_06g264900v5   uncharacterized protein 
 cre-r.1   CHLRE_06g265400v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G53650 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G53650 (ath-u.5 coexpression data)

CoexMap""


athAT3G53650 | Entrez gene ID : 28719403      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 2 3 3 3 3 2 3 3 3 3 3 3 3 3 2 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function Histone superfamily protein
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001319739.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001319739.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001319739.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G53650
ath-r.7
for
AT3G53650
ath-e.2
for
AT3G53650
ath-u.5
for
HTB1
ath-u.5
for
HTB4
bra-r.6
for
103829764
bra-r.6
for
103863386
bna-r.1
for
106346354
bna-r.1
for
106347524
bna-r.1
for
106352612
ghi-r.1
for
107889081
ghi-r.1
for
107889080
ghi-r.1
for
107963943
cit-r.1
for
102629049
cit-r.1
for
102624126
cit-r.1
for
127902174
gma-u.5
for
111828532
gma-u.5
for
100820177
gma-u.5
for
100817849
vvi-u.5
for
100263369
vvi-u.5
for
100258812
ppo-u.5
for
7468455
ppo-u.5
for
7469475
ppo-u.5
for
18101997
mtr-u.5
for
25492533
mtr-u.5
for
25485824
mtr-u.5
for
25492556
sly-u.5
for
101267024
sly-u.5
for
101264987
sly-u.5
for
101261496
sot-r.1
for
102582527
sot-r.1
for
102585268
sot-r.1
for
102585943
nta-r.1
for
107807323
nta-r.1
for
107815679
nta-r.1
for
107817295
osa-u.5
for
4324495
osa-u.5
for
4345904
osa-u.5
for
107278608
zma-u.5
for
100192792
zma-u.5
for
100273745
zma-u.5
for
100273491
tae-r.2
for
123102000
tae-r.2
for
123084871
tae-r.2
for
123045564
hvu-r.1
for
123440449
hvu-r.1
for
123440491
sbi-r.1
for
8055359
sbi-r.1
for
8061771
sbi-r.1
for
8084914
bdi-r.1
for
100846031
bdi-r.1
for
100823811
bdi-r.1
for
100841029
cre-r.1
for
CHLRE_06g264800v5
cre-r.1
for
CHLRE_06g264900v5
cre-r.1
for
CHLRE_06g265400v5

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Ortholog ID: 42
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo mtr mtr mtr sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi bdi cre cre cre
Symbol AT3G53650 HTB4 AT2G28720 LOC103829764 LOC103851535 LOC103841289 LOC106347524 LOC106440705 LOC106405890 LOC107963943 LOC107948824 LOC107963944 LOC102624126 LOC102608311 LOC111828532 LOC100805396 LOC100499734 LOC100263369 LOC100251955 LOC18101340 LOC25485824 LOC11431194 LOC25492748 LOC101267024 H2B-1 LOC102590470 LOC102601239 LOC107057692 LOC107804465 LOC107790383 LOC107777582 LOC4345904 LOC107278608 LOC100192792 LOC103639304 LOC103647254 LOC123160834 LOC123143170 LOC543489 LOC123442703 LOC123442706 LOC123451652 LOC8055359 LOC8072250 LOC100823811 LOC100829959 LOC100844075 CHLRE_17g713450v5 CHLRE_06g275800v5 CHLRE_17g711750v5
Function* Histone superfamily protein Histone superfamily protein Histone superfamily protein histone H2B.3 histone H2B.7 histone H2B.8 histone H2B.7 histone H2B.8 histone H2B.7 histone H2B-like histone H2B-like probable histone H2B.1 histone H2B.4 histone H2B-like probable histone H2B probable histone H2B.3 probable histone H2B.3 histone H2B.3 probable histone H2B.1-like probable histone H2B.3 probable histone H2B.3 probable histone H2B.3 probable histone H2B.2 histone H2B.3-like histone H2B histone H2B-like histone H2B histone H2B.1 histone H2B histone H2B-like histone H2B.3 histone H2B.2-like histone H2B.1 Histone H2B histone H2B.1-like histone H2B.5 histone H2B.3-like histone H2B.3-like histone H2B.1-like histone H2B.4-like histone H2B.4-like histone H2B.4-like histone H2B.3 histone H2B.1 histone H2B.1 histone H2B.1 histone H2B.3 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 5
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
osa00230 Purine metabolism 2
osa00240 Pyrimidine metabolism 2
osa00480 Glutathione metabolism 2
osa01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 3
sbi00230 Purine metabolism 2
sbi00240 Pyrimidine metabolism 2
sbi00480 Glutathione metabolism 2
sbi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
sbi00240 Pyrimidine metabolism 2
sbi00480 Glutathione metabolism 2
sbi01232 Nucleotide metabolism 2
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 28719403 836113 817421 103829764 103851535 103841289 106347524 106440705 106405890 107963943 107948824 107963944 102624126 102608311 111828532 100805396 100499734 100263369 100251955 18101340 25485824 11431194 25492748 101267024 778282 102590470 102601239 107057692 107804465 107790383 107777582 4345904 107278608 100192792 103639304 103647254 123160834 123143170 543489 123442703 123442706 123451652 8055359 8072250 100823811 100829959 100844075 5725960 5716755 66056963
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