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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G02160   CCCH-type zinc finger family protein 
 ath-r.7   AT2G02160   CCCH-type zinc finger family protein 
 ath-m.9   AT2G02160   CCCH-type zinc finger family protein 
 ath-e.2   AT2G02160   CCCH-type zinc finger family protein 
 ath-m.4.bio   AT2G02160   CCCH-type zinc finger family protein 
 ath-m.4.hor   AT2G02160   CCCH-type zinc finger family protein 
 ath-m.4.lig   AT2G02160   CCCH-type zinc finger family protein 
 ath-m.4.str   AT2G02160   CCCH-type zinc finger family protein 
 ath-m.4.tis   AT2G02160   CCCH-type zinc finger family protein 
 bra-r.6   103854015   zinc finger CCCH domain-containing protein 17 
 bna-r.1   106428527   zinc finger CCCH domain-containing protein 17 
 bna-r.1   106396116   zinc finger CCCH domain-containing protein 17 
 ghi-r.1   107918210   zinc finger CCCH domain-containing protein 17 
 ghi-r.1   107922054   zinc finger CCCH domain-containing protein 17 
 cit-r.1   102617828   zinc finger CCCH domain-containing protein 17 
 gma-u.5   102669253   zinc finger CCCH domain-containing protein 17 
 gma-u.5   100787836   zinc finger CCCH domain-containing protein 17 
 vvi-u.5   104880250   zinc finger CCCH domain-containing protein 17 
 ppo-u.5   7471466   zinc finger CCCH domain-containing protein 17 
 ppo-u.5   7462628   zinc finger CCCH domain-containing protein 17 
 mtr-u.5   120577334   zinc finger CCCH domain-containing protein 17 
 sly-u.5   101257295   zinc finger CCCH domain-containing protein 17 
 sly-u.5   101253884   zinc finger CCCH domain-containing protein 17 
 sot-r.1   102603511   zinc finger CCCH domain-containing protein 17-like 
 sot-r.1   102590225   zinc finger CCCH domain-containing protein 17 
 nta-r.1   107831774   zinc finger CCCH domain-containing protein 17-like 
 nta-r.1   107821289   zinc finger CCCH domain-containing protein 17 
 nta-r.1   107768786   zinc finger CCCH domain-containing protein 17-like 
 osa-u.5   4337362   zinc finger CCCH domain-containing protein 32-like 
 zma-u.5   100285144   zinc finger C-x8-C-x5-C-x3-H type family protein 
 tae-r.2   123047322   zinc finger CCCH domain-containing protein 32 
 tae-r.2   123055125   zinc finger CCCH domain-containing protein 32 
 tae-r.2   123190978   zinc finger CCCH domain-containing protein 32 
 hvu-r.1   123428406   zinc finger CCCH domain-containing protein 32-like 
 sbi-r.1   8082592   zinc finger CCCH domain-containing protein 32 
 bdi-r.1   100841804   zinc finger CCCH domain-containing protein 32 

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Top 50 coexpressed genes to AT2G02160 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G02160 (ath-u.5 coexpression data)

CoexMap"814747"


athAT2G02160 | Entrez gene ID : 814747      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 2 1 2 2 3 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (262 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  HDA IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_027420.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_027420.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_027420.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G02160
ath-r.7
for
AT2G02160
ath-m.9
for
AT2G02160
ath-e.2
for
AT2G02160
ath-m.4.bio
for
AT2G02160
ath-m.4.hor
for
AT2G02160
ath-m.4.lig
for
AT2G02160
ath-m.4.str
for
AT2G02160
ath-m.4.tis
for
AT2G02160
bra-r.6
for
103854015
bna-r.1
for
106428527
bna-r.1
for
106396116
ghi-r.1
for
107918210
ghi-r.1
for
107922054
cit-r.1
for
102617828
gma-u.5
for
102669253
gma-u.5
for
100787836
vvi-u.5
for
104880250
ppo-u.5
for
7471466
ppo-u.5
for
7462628
mtr-u.5
for
120577334
sly-u.5
for
101257295
sly-u.5
for
101253884
sot-r.1
for
102603511
sot-r.1
for
102590225
nta-r.1
for
107831774
nta-r.1
for
107821289
nta-r.1
for
107768786
osa-u.5
for
4337362
zma-u.5
for
100285144
tae-r.2
for
123047322
tae-r.2
for
123055125
tae-r.2
for
123190978
hvu-r.1
for
123428406
sbi-r.1
for
8082592
bdi-r.1
for
100841804


Ortholog ID: 7912
Species ath bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT2G02160 LOC103854015 LOC106428527 LOC106396116 LOC107918210 LOC107922054 LOC102617828 LOC102669253 LOC100787836 LOC104880250 LOC7471466 LOC7462628 LOC120577334 LOC101257295 LOC101253884 LOC102603511 LOC102590225 LOC107831774 LOC107768786 LOC107792775 LOC4337362 LOC100285144 LOC123047322 LOC123055125 LOC123190978 LOC123428406 LOC8082592 LOC100841804
Function* CCCH-type zinc finger family protein zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17-like zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17-like zinc finger CCCH domain-containing protein 17-like zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 32-like zinc finger C-x8-C-x5-C-x3-H type family protein zinc finger CCCH domain-containing protein 32 zinc finger CCCH domain-containing protein 32 zinc finger CCCH domain-containing protein 32 zinc finger CCCH domain-containing protein 32-like zinc finger CCCH domain-containing protein 32 zinc finger CCCH domain-containing protein 32
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae03040 Spliceosome 2
tae00330 Arginine and proline metabolism 2
tae00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814747 103854015 106428527 106396116 107918210 107922054 102617828 102669253 100787836 104880250 7471466 7462628 120577334 101257295 101253884 102603511 102590225 107831774 107768786 107792775 4337362 100285144 123047322 123055125 123190978 123428406 8082592 100841804
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