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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G04860   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-r.7   AT2G04860   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.9   AT2G04860   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-e.2   AT2G04860   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.bio   AT2G04860   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   AT2G04860   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.lig   AT2G04860   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.str   AT2G04860   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.tis   AT2G04860   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100787089   pentatricopeptide repeat-containing protein At2g04860 
 vvi-u.5   100250665   pentatricopeptide repeat-containing protein At2g04860 
 ppo-u.5   18104895   pentatricopeptide repeat-containing protein At2g04860 
 mtr-u.5   11431817   pentatricopeptide repeat-containing protein At2g04860 

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Top 50 coexpressed genes to AT2G04860 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G04860 (ath-u.5 coexpression data)

CoexMap"815032"


athAT2G04860 | Entrez gene ID : 815032      
Species ath gma vvi ppo mtr sot hvu tae cit sbi sly zma ghi cre bna nta bdi bra osa
Paralog 9 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_178563.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  E.R. 1,  mito 1,  vacu 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_178563.2)
Subcellular
localization
TargetP
other 3  (predict for NP_178563.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G04860

.
ath-r.7
for
AT2G04860

.
ath-m.9
for
AT2G04860

.
ath-e.2
for
AT2G04860

.
ath-m.4.bio
for
AT2G04860

.
ath-m.4.hor
for
AT2G04860

.
ath-m.4.lig
for
AT2G04860

.
ath-m.4.str
for
AT2G04860

.
ath-m.4.tis
for
AT2G04860

.
gma-u.5
for
100787089

.
vvi-u.5
for
100250665

.
ppo-u.5
for
18104895

.
mtr-u.5
for
11431817

.


Ortholog ID: 15806
Species ath gma bra vvi ppo mtr ghi
Symbol AT2G04860 LOC100787089 LOC103860319 LOC100250665 LOC18104895 LOC11431817 LOC107922427
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g04860 pentatricopeptide repeat-containing protein At2g04860 pentatricopeptide repeat-containing protein At2g04860 pentatricopeptide repeat-containing protein At2g04860 pentatricopeptide repeat-containing protein At2g04860 pentatricopeptide repeat-containing protein At2g04860
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 815032 100787089 103860319 100250665 18104895 11431817 107922427
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