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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   EMB2762   CCAAT-binding factor 
 ath-r.7   EMB2762   CCAAT-binding factor 
 ath-m.9   EMB2762   CCAAT-binding factor 
 ath-e.2   EMB2762   CCAAT-binding factor 
 ath-m.4.bio   EMB2762   CCAAT-binding factor 
 ath-m.4.hor   EMB2762   CCAAT-binding factor 
 ath-m.4.lig   EMB2762   CCAAT-binding factor 
 ath-m.4.str   EMB2762   CCAAT-binding factor 
 ath-m.4.tis   EMB2762   CCAAT-binding factor 
 gma-u.5   100795086   protein NUCLEOLAR COMPLEX ASSOCIATED 4 
 gma-u.5   100804223   protein NUCLEOLAR COMPLEX ASSOCIATED 4 
 vvi-u.5   104878215   protein NUCLEOLAR COMPLEX ASSOCIATED 4 
 ppo-u.5   7463361   protein NUCLEOLAR COMPLEX ASSOCIATED 4 
 mtr-u.5   11435382   protein NUCLEOLAR COMPLEX ASSOCIATED 4 
 sly-u.5   101252639   protein NUCLEOLAR COMPLEX ASSOCIATED 4 
 osa-u.5   4336790   glutamate receptor 3.1-like 
 zma-u.5   100281607   uncharacterized LOC100281607 

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Top 50 coexpressed genes to EMB2762 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to EMB2762 (ath-u.5 coexpression data)

CoexMap"816230"


athEMB2762 | Entrez gene ID : 816230      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 9 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (183 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO CC
GO:0005654 [list] [network] nucleoplasm  (262 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (394 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_179316.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 2,  chlo 2,  cysk_nucl 1,  cyto 1,  E.R. 1,  chlo_mito 1,  cyto_E.R. 1  (predict for NP_179316.2)
Subcellular
localization
TargetP
other 6  (predict for NP_179316.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
EMB2762

.
ath-r.7
for
EMB2762

.
ath-m.9
for
EMB2762

.
ath-e.2
for
EMB2762

.
ath-m.4.bio
for
EMB2762

.
ath-m.4.hor
for
EMB2762

.
ath-m.4.lig
for
EMB2762

.
ath-m.4.str
for
EMB2762

.
ath-m.4.tis
for
EMB2762

.
gma-u.5
for
100795086

.
gma-u.5
for
100804223

.
vvi-u.5
for
104878215

.
ppo-u.5
for
7463361

.
mtr-u.5
for
11435382

.
sly-u.5
for
101252639

.
osa-u.5
for
4336790

.
zma-u.5
for
100281607

.


Ortholog ID: 11938
Species ath gma gma sly osa zma bra bra vvi ppo mtr ghi ghi bna bna cre sot cit nta nta
Symbol EMB2762 LOC100804223 LOC100795086 LOC101252639 LOC4336790 LOC100281607 LOC103845980 LOC103837796 LOC104878215 LOC7463361 LOC11435382 LOC107920777 LOC107894002 LOC106400804 LOC106430776 CHLRE_01g068377v5 LOC102579410 LOC102630375 LOC107760954 LOC107820703
Function* CCAAT-binding factor protein NUCLEOLAR COMPLEX ASSOCIATED 4 protein NUCLEOLAR COMPLEX ASSOCIATED 4 protein NUCLEOLAR COMPLEX ASSOCIATED 4 glutamate receptor 3.1-like uncharacterized LOC100281607 uncharacterized protein C1604.06c uncharacterized protein C1604.06c protein NUCLEOLAR COMPLEX ASSOCIATED 4 protein NUCLEOLAR COMPLEX ASSOCIATED 4 protein NUCLEOLAR COMPLEX ASSOCIATED 4 protein NUCLEOLAR COMPLEX ASSOCIATED 4 protein NUCLEOLAR COMPLEX ASSOCIATED 4 protein NUCLEOLAR COMPLEX ASSOCIATED 4 protein NUCLEOLAR COMPLEX ASSOCIATED 4 uncharacterized protein nucleolar complex protein 4 homolog protein NUCLEOLAR COMPLEX ASSOCIATED 4 protein NUCLEOLAR COMPLEX ASSOCIATED 4-like protein NUCLEOLAR COMPLEX ASSOCIATED 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 7
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816230 100804223 100795086 101252639 4336790 100281607 103845980 103837796 104878215 7463361 11435382 107920777 107894002 106400804 106430776 5725756 102579410 102630375 107760954 107820703
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