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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G18670   RING/U-box superfamily protein 
 ath-r.7   AT2G18670   RING/U-box superfamily protein 
 ath-m.9   AT2G18670   RING/U-box superfamily protein 
 ath-e.2   AT2G18670   RING/U-box superfamily protein 
 ath-m.4.bio   AT2G18670   RING/U-box superfamily protein 
 ath-m.4.hor   AT2G18670   RING/U-box superfamily protein 
 ath-m.4.lig   AT2G18670   RING/U-box superfamily protein 
 ath-m.4.str   AT2G18670   RING/U-box superfamily protein 
 ath-m.4.tis   AT2G18670   RING/U-box superfamily protein 
 ath-u.5   AT4G30370   RING/U-box superfamily protein 
 gma-u.5   102670430   RING-H2 finger protein ATL56 
 gma-u.5   102664895   RING-H2 finger protein ATL56 
 vvi-u.5   104880755   RING-H2 finger protein ATL56 
 ppo-u.5   112324979   RING-H2 finger protein ATL56 
 mtr-u.5   25494261   RING-H2 finger protein ATL56 

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Top 50 coexpressed genes to AT2G18670 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G18670 (ath-u.5 coexpression data)

CoexMap"816382"


athAT2G18670 | Entrez gene ID : 816382      
Species ath gma vvi ppo mtr sot hvu tae cit sbi sly zma ghi cre bna nta bdi bra osa
Paralog 10 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071456 [list] [network] cellular response to hypoxia  (241 genes)  HEP  
GO CC
GO MF
Protein NP_179457.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  E.R. 1,  nucl 1,  mito 1,  E.R._vacu 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_179457.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_179457.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G18670

.
ath-r.7
for
AT2G18670

.
ath-m.9
for
AT2G18670

.
ath-e.2
for
AT2G18670

.
ath-m.4.bio
for
AT2G18670

.
ath-m.4.hor
for
AT2G18670

.
ath-m.4.lig
for
AT2G18670

.
ath-m.4.str
for
AT2G18670

.
ath-m.4.tis
for
AT2G18670

.
ath-u.5
for
AT4G30370

.
gma-u.5
for
102670430

.
gma-u.5
for
102664895

.
vvi-u.5
for
104880755

.
ppo-u.5
for
112324979

.
mtr-u.5
for
25494261

.


Ortholog ID: 12178
Species ath ath gma gma bra vvi ppo mtr ghi ghi bna sot cit
Symbol AT4G30370 AT2G18670 LOC102670430 LOC102664895 LOC103834676 LOC104880755 LOC112324979 LOC25494261 LOC121204752 LOC107928255 LOC106386248 LOC102587027 LOC102614149
Function* RING/U-box superfamily protein RING/U-box superfamily protein RING-H2 finger protein ATL56 RING-H2 finger protein ATL56 RING-H2 finger protein ATL14 RING-H2 finger protein ATL56 RING-H2 finger protein ATL56 RING-H2 finger protein ATL56 RING-H2 finger protein ATL56 RING-H2 finger protein ATL56 RING-H2 finger protein ATL14-like RING-H2 finger protein ATL56-like RING-H2 finger protein ATL56
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit01230 Biosynthesis of amino acids 3
cit00010 Glycolysis / Gluconeogenesis 2
cit00710 Carbon fixation by Calvin cycle 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829160 816382 102670430 102664895 103834676 104880755 112324979 25494261 121204752 107928255 106386248 102587027 102614149
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