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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   GGPS2   geranylgeranyl pyrophosphate synthase 2 
 ath-r.7   GGPS2   geranylgeranyl pyrophosphate synthase 2 
 ath-m.9   GGPS2   geranylgeranyl pyrophosphate synthase 2 
 ath-e.2   GGPS2   geranylgeranyl pyrophosphate synthase 2 
 ath-m.4.bio   GGPS2   geranylgeranyl pyrophosphate synthase 2 
 ath-m.4.hor   GGPS2   geranylgeranyl pyrophosphate synthase 2 
 ath-m.4.lig   GGPS2   geranylgeranyl pyrophosphate synthase 2 
 ath-m.4.str   GGPS2   geranylgeranyl pyrophosphate synthase 2 
 ath-m.4.tis   GGPS2   geranylgeranyl pyrophosphate synthase 2 

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Top 50 coexpressed genes to GGPS2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GGPS2 (ath-u.5 coexpression data)

CoexMap"816912"


athGGPS2 | Entrez gene ID : 816912      
Species ath zma cre bdi sbi sot cit bna gma nta osa ghi vvi tae bra hvu ppo mtr sly
Paralog 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00900 [list] [network] Terpenoid backbone biosynthesis (61 genes)
GO BP
GO:0008299 [list] [network] isoprenoid biosynthetic process  (131 genes)  TAS  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (897 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0004311 [list] [network] geranylgeranyl diphosphate synthase activity  (9 genes)  IDA IGI  
Protein NP_179960.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  E.R. 1  (predict for NP_179960.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_179960.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
GGPS2
ath-r.7
for
GGPS2
ath-m.9
for
GGPS2
ath-e.2
for
GGPS2
ath-m.4.bio
for
GGPS2
ath-m.4.hor
for
GGPS2
ath-m.4.lig
for
GGPS2
ath-m.4.str
for
GGPS2
ath-m.4.tis
for
GGPS2


Ortholog ID: 25895
Species ath
Symbol GGPS2
Function* geranylgeranyl pyrophosphate synthase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
Expression Expression pattern
Entrez Gene ID* 816912
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