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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   CYP5   cyclophilin 5 
 ath-r.7   CYP5   cyclophilin 5 
 ath-m.9   CYP5   cyclophilin 5 
 ath-e.2   CYP5   cyclophilin 5 
 ath-m.4.bio   CYP5   cyclophilin 5 
 ath-m.4.hor   CYP5   cyclophilin 5 
 ath-m.4.lig   CYP5   cyclophilin 5 
 ath-m.4.str   CYP5   cyclophilin 5 
 ath-m.4.tis   CYP5   cyclophilin 5 
 ath-u.5   AT3G55920   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 
 ath-u.5   ROC7   rotamase CYP 7 
 bra-r.6   103856667   peptidyl-prolyl cis-trans isomerase CYP20-1 
 bra-r.6   103845303   peptidyl-prolyl cis-trans isomerase CYP20-1 
 bra-r.6   103867999   peptidyl-prolyl cis-trans isomerase CYP19-4 
 bna-r.1   125590302   peptidyl-prolyl cis-trans isomerase CYP20-1 
 bna-r.1   125579203   peptidyl-prolyl cis-trans isomerase CYP20-1 
 bna-r.1   106440575   peptidyl-prolyl cis-trans isomerase CYP20-1 
 ghi-r.1   107889059   peptidyl-prolyl cis-trans isomerase CYP19-4 
 ghi-r.1   107891621   peptidyl-prolyl cis-trans isomerase CYP19-4 
 ghi-r.1   121222639   peptidyl-prolyl cis-trans isomerase CYP19-4 
 cit-r.1   102630374   peptidyl-prolyl cis-trans isomerase CYP19-4-like 
 cit-r.1   102622712   peptidyl-prolyl cis-trans isomerase CYP20-1 
 gma-u.5   CYP24   peptidyl-prolyl cis-trans isomerase CYP24 
 gma-u.5   CYP34   peptidyl-prolyl cis-trans isomerase CYP34 
 vvi-u.5   100241683   peptidyl-prolyl cis-trans isomerase CYP20-1 
 vvi-u.5   100251977   peptidyl-prolyl cis-trans isomerase CYP20-1 
 ppo-u.5   7478530   peptidyl-prolyl cis-trans isomerase CYP20-1 
 ppo-u.5   7474436   peptidyl-prolyl cis-trans isomerase CYP19-4 
 ppo-u.5   7468558   peptidyl-prolyl cis-trans isomerase CYP20-1 
 mtr-u.5   25490877   peptidyl-prolyl cis-trans isomerase CYP20-1 
 sly-u.5   101253904   peptidyl-prolyl cis-trans isomerase B 
 sly-u.5   101255407   peptidyl-prolyl cis-trans isomerase CYP19-4 
 sot-r.1   102602764   peptidyl-prolyl cis-trans isomerase CYP19-4-like 
 sot-r.1   102589666   peptidyl-prolyl cis-trans isomerase CYP19-4 
 nta-r.1   107832275   peptidyl-prolyl cis-trans isomerase CYP20-1-like 
 nta-r.1   107824613   peptidyl-prolyl cis-trans isomerase CYP20-1-like 
 nta-r.1   107787561   peptidyl-prolyl cis-trans isomerase CYP19-4 
 osa-u.5   4342022   peptidyl-prolyl cis-trans isomerase CYP20-1 
 osa-u.5   4342020   peptidyl-prolyl cis-trans isomerase CYP20-1 
 zma-u.5   107522027   Peptidyl-prolyl cis-trans isomerase CYP20-1 
 zma-u.5   109940172   peptidyl-prolyl cis-trans isomerase CYP20-1 
 zma-u.5   100283475   peptidyl-prolyl cis-trans isomerase CYP19-4 
 tae-r.2   542967   peptidyl-prolyl cis-trans isomerase CYP19-4 
 tae-r.2   123148543   peptidyl-prolyl cis-trans isomerase CYP19-4 
 tae-r.2   123156907   peptidyl-prolyl cis-trans isomerase CYP19-4 
 hvu-r.1   123407251   peptidyl-prolyl cis-trans isomerase CYP19-4-like 
 sbi-r.1   8064965   peptidyl-prolyl cis-trans isomerase CYP20-1 
 bdi-r.1   100828170   peptidyl-prolyl cis-trans isomerase CYP20-1 
 cre-r.1   CHLRE_06g284900v5   uncharacterized protein 

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Top 50 coexpressed genes to CYP5 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CYP5 (ath-u.5 coexpression data)

CoexMap""


athCYP5 | Entrez gene ID : 817546      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 3 3 3 2 2 2 3 1 2 2 3 2 3 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function cyclophilin 5
KEGG
GO BP
GO:0061083 [list] [network] regulation of protein refolding  (1 genes)  IDA  
GO CC
GO:0005771 [list] [network] multivesicular body  (14 genes)  IDA  
GO:0099503 [list] [network] secretory vesicle  (172 genes)  HDA  
GO:0005795 [list] [network] Golgi stack  (193 genes)  IDA  
GO:0005777 [list] [network] peroxisome  (313 genes)  HDA  
GO:0005783 [list] [network] endoplasmic reticulum  (897 genes)  HDA IDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  RCA  
GO:0005829 [list] [network] cytosol  (2593 genes)  IDA  
GO:0016020 [list] [network] membrane  (3740 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity  (32 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001077978.1 [sequence] [blastp]
NP_001318316.1 [sequence] [blastp]
NP_180557.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 6,  cyto 2,  vacu 1  (predict for NP_001077978.1)
extr 6,  chlo 1,  vacu 1,  cyto 1,  mito 1,  E.R._vacu 1  (predict for NP_001318316.1)
extr 6,  chlo 1,  vacu 1,  cyto 1,  mito 1,  E.R._vacu 1  (predict for NP_180557.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001077978.1)
scret 9  (predict for NP_001318316.1)
scret 9  (predict for NP_180557.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
CYP5
ath-r.7
for
CYP5
ath-m.9
for
CYP5
ath-e.2
for
CYP5
ath-m.4.bio
for
CYP5
ath-m.4.hor
for
CYP5
ath-m.4.lig
for
CYP5
ath-m.4.str
for
CYP5
ath-m.4.tis
for
CYP5
ath-u.5
for
AT3G55920
ath-u.5
for
ROC7
bra-r.6
for
103856667
bra-r.6
for
103845303
bra-r.6
for
103867999
bna-r.1
for
125590302
bna-r.1
for
125579203
bna-r.1
for
106440575
ghi-r.1
for
107889059
ghi-r.1
for
107891621
ghi-r.1
for
121222639
cit-r.1
for
102630374
cit-r.1
for
102622712
gma-u.5
for
CYP24
gma-u.5
for
CYP34
vvi-u.5
for
100241683
vvi-u.5
for
100251977
ppo-u.5
for
7478530
ppo-u.5
for
7474436
ppo-u.5
for
7468558
mtr-u.5
for
25490877
sly-u.5
for
101253904
sly-u.5
for
101255407
sot-r.1
for
102602764
sot-r.1
for
102589666
nta-r.1
for
107832275
nta-r.1
for
107824613
nta-r.1
for
107787561
osa-u.5
for
4342022
osa-u.5
for
4342020
zma-u.5
for
107522027
zma-u.5
for
109940172
zma-u.5
for
100283475
tae-r.2
for
542967
tae-r.2
for
123148543
tae-r.2
for
123156907
hvu-r.1
for
123407251
sbi-r.1
for
8064965
bdi-r.1
for
100828170
cre-r.1
for
CHLRE_06g284900v5

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Ortholog ID: 3203
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma vvi vvi ppo ppo ppo mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu sbi bdi cre
Symbol CYP5 AT3G55920 ROC7 LOC103856667 LOC103845303 LOC103867999 LOC125590302 LOC106377253 LOC106434116 LOC107889059 LOC107891621 LOC107931852 LOC102630374 LOC102622712 CYP24 CYP34 LOC100241683 LOC100251977 LOC7478530 LOC7474436 LOC7468558 LOC25490877 LOC101253904 LOC101255407 LOC102602764 LOC102589666 LOC107787561 LOC107767094 LOC107804715 LOC4342022 LOC4342020 LOC107522027 LOC109940172 LOC100283475 LOC542967 LOC123148543 LOC123156907 LOC123407251 LOC8064965 LOC100828170 CHLRE_06g284900v5
Function* cyclophilin 5 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein rotamase CYP 7 peptidyl-prolyl cis-trans isomerase CYP20-1 peptidyl-prolyl cis-trans isomerase CYP20-1 peptidyl-prolyl cis-trans isomerase CYP19-4 peptidyl-prolyl cis-trans isomerase CYP20-1 peptidyl-prolyl cis-trans isomerase CYP19-4 peptidyl-prolyl cis-trans isomerase CYP19-4 peptidyl-prolyl cis-trans isomerase CYP19-4 peptidyl-prolyl cis-trans isomerase CYP19-4 peptidyl-prolyl cis-trans isomerase CYP19-4 peptidyl-prolyl cis-trans isomerase CYP19-4-like peptidyl-prolyl cis-trans isomerase CYP20-1 peptidyl-prolyl cis-trans isomerase CYP24 peptidyl-prolyl cis-trans isomerase CYP34 peptidyl-prolyl cis-trans isomerase CYP20-1 peptidyl-prolyl cis-trans isomerase CYP20-1 peptidyl-prolyl cis-trans isomerase CYP20-1 peptidyl-prolyl cis-trans isomerase CYP19-4 peptidyl-prolyl cis-trans isomerase CYP20-1 peptidyl-prolyl cis-trans isomerase CYP20-1 peptidyl-prolyl cis-trans isomerase B peptidyl-prolyl cis-trans isomerase CYP19-4 peptidyl-prolyl cis-trans isomerase CYP19-4-like peptidyl-prolyl cis-trans isomerase CYP19-4 peptidyl-prolyl cis-trans isomerase CYP19-4 peptidyl-prolyl cis-trans isomerase CYP20-1 peptidyl-prolyl cis-trans isomerase CYP20-1-like peptidyl-prolyl cis-trans isomerase CYP20-1 peptidyl-prolyl cis-trans isomerase CYP20-1 Peptidyl-prolyl cis-trans isomerase CYP20-1 peptidyl-prolyl cis-trans isomerase CYP20-1 peptidyl-prolyl cis-trans isomerase CYP19-4 peptidyl-prolyl cis-trans isomerase CYP19-4 peptidyl-prolyl cis-trans isomerase CYP19-4 peptidyl-prolyl cis-trans isomerase CYP19-4 peptidyl-prolyl cis-trans isomerase CYP19-4-like peptidyl-prolyl cis-trans isomerase CYP20-1 peptidyl-prolyl cis-trans isomerase CYP20-1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 2
ath00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 11
ath04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 8
bra04145 Phagosome 6
bra03060 Protein export 4
bra04148 Efferocytosis 4
bra00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
bra04145 Phagosome 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00541 Biosynthesis of various nucleotide sugars 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna00920 Sulfur metabolism 2
bna04122 Sulfur relay system 2
bna04075 Plant hormone signal transduction 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna00920 Sulfur metabolism 2
bna04122 Sulfur relay system 2
bna04075 Plant hormone signal transduction 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 11
ghi04145 Phagosome 5
ghi04148 Efferocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 11
ghi04145 Phagosome 5
ghi04148 Efferocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03010 Ribosome 3
cit03083 Polycomb repressive complex 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 8
gma04145 Phagosome 3
gma04148 Efferocytosis 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04141 Protein processing in endoplasmic reticulum 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03040 Spliceosome 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 6
vvi04145 Phagosome 3
vvi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 11
ppo04145 Phagosome 4
ppo00510 N-Glycan biosynthesis 2
ppo03060 Protein export 2
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 8
mtr04145 Phagosome 4
mtr03060 Protein export 3
mtr00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 8
sly03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 11
sot04145 Phagosome 3
sot00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 11
osa00510 N-Glycan biosynthesis 7
osa00513 Various types of N-glycan biosynthesis 7
osa03060 Protein export 2
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 10
zma03060 Protein export 3
zma04145 Phagosome 3
zma00510 N-Glycan biosynthesis 3
zma00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae00510 N-Glycan biosynthesis 3
tae00513 Various types of N-glycan biosynthesis 3
tae00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae00510 N-Glycan biosynthesis 2
tae00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817546 824758 835985 103856667 103845303 103867999 125590302 106377253 106434116 107889059 107891621 107931852 102630374 102622712 100305485 100792140 100241683 100251977 7478530 7474436 7468558 25490877 101253904 101255407 102602764 102589666 107787561 107767094 107804715 4342022 4342020 107522027 109940172 100283475 542967 123148543 123156907 123407251 8064965 100828170 5720988
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