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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   GRL   transcription activator 
 ath-r.7   GRL   transcription activator 
 ath-m.9   GRL   transcription activator 
 ath-e.2   GRL   transcription activator 
 ath-m.4.bio   GRL   transcription activator 
 ath-m.4.hor   GRL   transcription activator 
 ath-m.4.lig   GRL   transcription activator 
 ath-m.4.str   GRL   transcription activator 
 ath-m.4.tis   GRL   transcription activator 
 bra-r.6   103867391   protein NAP1 
 bna-r.1   125574967   protein NAP1-like 
 bna-r.1   106389716   protein NAP1 
 bna-r.1   125600506   protein NAP1 
 ghi-r.1   107951943   protein NAP1 
 ghi-r.1   107922024   protein NAP1 
 cit-r.1   102611828   protein NAP1 
 gma-u.5   100780997   protein NAP1 
 vvi-u.5   100264488   protein NAP1 
 ppo-u.5   7476731   protein NAP1 
 ppo-u.5   7453990   protein NAP1 
 mtr-u.5   25492951   protein NAP1 
 mtr-u.5   11445083   protein NAP1 
 sly-u.5   101259399   protein NAP1 
 sot-r.1   102591765   protein NAP1 
 nta-r.1   107825514   protein NAP1 
 nta-r.1   107776150   protein NAP1 
 osa-u.5   4346211   probable protein NAP1 
 zma-u.5   103630477   probable protein NAP1 
 zma-u.5   100502470   uncharacterized LOC100502470 
 tae-r.2   123152294   probable protein NAP1 
 tae-r.2   123158596   probable protein NAP1 
 tae-r.2   123168185   probable protein NAP1 
 hvu-r.1   123412168   probable protein NAP1 
 sbi-r.1   8070367   probable protein NAP1 
 bdi-r.1   100834124   probable protein NAP1 

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Top 50 coexpressed genes to GRL (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GRL (ath-u.5 coexpression data)

CoexMap"818077"


athGRL | Entrez gene ID : 818077      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 3 2 1 1 1 2 2 1 1 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034051 [list] [network] negative regulation of plant-type hypersensitive response  (10 genes)  IMP  
GO:0045010 [list] [network] actin nucleation  (13 genes)  TAS  
GO:0009825 [list] [network] multidimensional cell growth  (43 genes)  IMP  
GO:0007015 [list] [network] actin filament organization  (65 genes)  IMP  
GO:0010090 [list] [network] trichome morphogenesis  (66 genes)  IMP  
GO:0045087 [list] [network] innate immune response  (157 genes)  IMP  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (262 genes)  IDA  
GO CC
GO:0031209 [list] [network] SCAR complex  (8 genes)  TAS  
GO:0005789 [list] [network] endoplasmic reticulum membrane  (120 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO MF
GO:0140693 [list] [network] molecular condensate scaffold activity  (1 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001031485.1 [sequence] [blastp]
NP_181056.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  chlo 1,  vacu 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001031485.1)
nucl 6,  cyto 1,  chlo 1,  vacu 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_181056.2)
Subcellular
localization
TargetP
mito 3,  other 3,  chlo 3  (predict for NP_001031485.1)
mito 3,  other 3,  chlo 3  (predict for NP_181056.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
GRL
ath-r.7
for
GRL
ath-m.9
for
GRL
ath-e.2
for
GRL
ath-m.4.bio
for
GRL
ath-m.4.hor
for
GRL
ath-m.4.lig
for
GRL
ath-m.4.str
for
GRL
ath-m.4.tis
for
GRL
bra-r.6
for
103867391
bna-r.1
for
125574967
bna-r.1
for
106389716
bna-r.1
for
125600506
ghi-r.1
for
107951943
ghi-r.1
for
107922024
cit-r.1
for
102611828
gma-u.5
for
100780997
vvi-u.5
for
100264488
ppo-u.5
for
7476731
ppo-u.5
for
7453990
mtr-u.5
for
25492951
mtr-u.5
for
11445083
sly-u.5
for
101259399
sot-r.1
for
102591765
nta-r.1
for
107825514
nta-r.1
for
107776150
osa-u.5
for
4346211
zma-u.5
for
103630477
zma-u.5
for
100502470
tae-r.2
for
123152294
tae-r.2
for
123158596
tae-r.2
for
123168185
hvu-r.1
for
123412168
sbi-r.1
for
8070367
bdi-r.1
for
100834124


Ortholog ID: 8899
Species ath bra bna bna bna ghi ghi cit gma vvi ppo ppo mtr mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol GRL LOC103867391 LOC125574967 LOC106389716 LOC125600506 LOC107951943 LOC107922024 LOC102611828 LOC100780997 LOC100264488 LOC7476731 LOC7453990 LOC25492951 LOC11445083 LOC101259399 LOC102591765 LOC107825514 LOC107776150 LOC4346211 LOC103630477 LOC100502470 LOC123152294 LOC123158596 LOC123168185 LOC123412168 LOC8070367 LOC100834124
Function* transcription activator protein NAP1 protein NAP1-like protein NAP1 protein NAP1 protein NAP1 protein NAP1 protein NAP1 protein NAP1 protein NAP1 protein NAP1 protein NAP1 protein NAP1 protein NAP1 protein NAP1 protein NAP1 protein NAP1 protein NAP1 probable protein NAP1 probable protein NAP1 uncharacterized LOC100502470 probable protein NAP1 probable protein NAP1 probable protein NAP1 probable protein NAP1 probable protein NAP1 probable protein NAP1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 5
ath04142 Lysosome 3
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 4
bra04144 Endocytosis 3
bra05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
bna03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
bna03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
bna03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00514 Other types of O-glycan biosynthesis 2
gma03083 Polycomb repressive complex 2
gma02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 2
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 2
tae04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00531 Glycosaminoglycan degradation 6
tae04142 Lysosome 6
tae00052 Galactose metabolism 3
tae00511 Other glycan degradation 3
tae00600 Sphingolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
sbi04144 Endocytosis 2
sbi05100 Bacterial invasion of epithelial cells 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818077 103867391 125574967 106389716 125600506 107951943 107922024 102611828 100780997 100264488 7476731 7453990 25492951 11445083 101259399 102591765 107825514 107776150 4346211 103630477 100502470 123152294 123158596 123168185 123412168 8070367 100834124
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