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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G40600   appr-1-p processing enzyme family protein 
 ath-r.7   AT2G40600   appr-1-p processing enzyme family protein 
 ath-m.9   AT2G40600   appr-1-p processing enzyme family protein 
 ath-e.2   AT2G40600   appr-1-p processing enzyme family protein 
 ath-m.4.bio   AT2G40600   appr-1-p processing enzyme family protein 
 ath-m.4.hor   AT2G40600   appr-1-p processing enzyme family protein 
 ath-m.4.lig   AT2G40600   appr-1-p processing enzyme family protein 
 ath-m.4.str   AT2G40600   appr-1-p processing enzyme family protein 
 ath-m.4.tis   AT2G40600   appr-1-p processing enzyme family protein 
 bra-r.6   103866509   macro domain-containing protein VPA0103 
 bra-r.6   103866024   macro domain-containing protein VPA0103 
 bra-r.6   103865823   macro domain-containing protein VPA0103 
 ghi-r.1   107959339   macro domain-containing protein VPA0103 
 ghi-r.1   107940480   macro domain-containing protein VPA0103 
 ghi-r.1   107916274   macro domain-containing protein VPA0103 
 cit-r.1   102614960   uncharacterized LOC102614960 
 cit-r.1   102609366   uncharacterized LOC102609366 
 cit-r.1   127898569   uncharacterized LOC127898569 
 gma-u.5   100811169   macro domain-containing protein XCC3184 
 vvi-u.5   100267229   macro domain-containing protein VPA0103-like 
 ppo-u.5   7479030   uncharacterized LOC7479030 
 mtr-u.5   11421377   macro domain-containing protein XCC3184 
 sly-u.5   101264723   uncharacterized LOC101264723 
 sot-r.1   102583280   macro domain-containing protein VPA0103 
 nta-r.1   107804643   uncharacterized LOC107804643 
 nta-r.1   107803566   uncharacterized LOC107803566 
 osa-u.5   4332764   uncharacterized LOC4332764 
 zma-u.5   100193297   Protein LRP16 
 tae-r.2   123081923   macro domain-containing protein VPA0103 
 tae-r.2   123092203   macro domain-containing protein VPA0103 
 tae-r.2   123099928   macro domain-containing protein VPA0103 
 hvu-r.1   123448700   macro domain-containing protein VPA0103 
 sbi-r.1   8083662   macro domain-containing protein VPA0103 
 bdi-r.1   100824222   macro domain-containing protein VPA0103 
 cre-r.1   CHLRE_12g492900v5   uncharacterized protein 
 cre-r.1   CHLRE_07g336850v5   uncharacterized protein 

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Top 50 coexpressed genes to AT2G40600 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G40600 (ath-u.5 coexpression data)

CoexMap"818655"


athAT2G40600 | Entrez gene ID : 818655      
Species ath bra ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre bna
Paralog 9 3 3 3 1 1 1 1 1 1 2 1 1 3 1 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_030605.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for NP_030605.2)
Subcellular
localization
TargetP
chlo 8,  mito 6  (predict for NP_030605.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G40600
ath-r.7
for
AT2G40600
ath-m.9
for
AT2G40600
ath-e.2
for
AT2G40600
ath-m.4.bio
for
AT2G40600
ath-m.4.hor
for
AT2G40600
ath-m.4.lig
for
AT2G40600
ath-m.4.str
for
AT2G40600
ath-m.4.tis
for
AT2G40600
bra-r.6
for
103866509
bra-r.6
for
103866024
bra-r.6
for
103865823
ghi-r.1
for
107959339
ghi-r.1
for
107940480
ghi-r.1
for
107916274
cit-r.1
for
102614960
cit-r.1
for
102609366
cit-r.1
for
127898569
gma-u.5
for
100811169
vvi-u.5
for
100267229
ppo-u.5
for
7479030
mtr-u.5
for
11421377
sly-u.5
for
101264723
sot-r.1
for
102583280
nta-r.1
for
107804643
nta-r.1
for
107803566
osa-u.5
for
4332764
zma-u.5
for
100193297
tae-r.2
for
123081923
tae-r.2
for
123092203
tae-r.2
for
123099928
hvu-r.1
for
123448700
sbi-r.1
for
8083662
bdi-r.1
for
100824222
cre-r.1
for
CHLRE_12g492900v5
cre-r.1
for
CHLRE_07g336850v5


Ortholog ID: 6242
Species ath bra bra bra bna ghi ghi ghi cit cit cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre cre
Symbol AT2G40600 LOC103866509 LOC103866024 LOC103865823 LOC106391611 LOC107959339 LOC107940480 LOC107916274 LOC102614960 LOC102609366 LOC127898569 LOC100811169 LOC100267229 LOC7479030 LOC11421377 LOC101264723 LOC102583280 LOC107804643 LOC107803566 LOC4332764 LOC100193297 LOC123081923 LOC123092203 LOC123099928 LOC123448700 LOC8083662 LOC100824222 CHLRE_12g492900v5 CHLRE_07g336850v5
Function* appr-1-p processing enzyme family protein macro domain-containing protein VPA0103 macro domain-containing protein VPA0103 macro domain-containing protein VPA0103 macro domain-containing protein VPA0103 macro domain-containing protein VPA0103 macro domain-containing protein VPA0103 macro domain-containing protein VPA0103 uncharacterized LOC102614960 uncharacterized LOC102609366 uncharacterized LOC127898569 macro domain-containing protein XCC3184 macro domain-containing protein VPA0103-like uncharacterized LOC7479030 macro domain-containing protein XCC3184 uncharacterized LOC101264723 macro domain-containing protein VPA0103 uncharacterized LOC107804643 uncharacterized LOC107803566 uncharacterized LOC4332764 Protein LRP16 macro domain-containing protein VPA0103 macro domain-containing protein VPA0103 macro domain-containing protein VPA0103 macro domain-containing protein VPA0103 macro domain-containing protein VPA0103 macro domain-containing protein VPA0103 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 7
bna04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 4
ghi00480 Glutathione metabolism 4
ghi00260 Glycine, serine and threonine metabolism 2
ghi00670 One carbon pool by folate 2
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 4
ghi00480 Glutathione metabolism 4
ghi00260 Glycine, serine and threonine metabolism 2
ghi00670 One carbon pool by folate 2
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit00051 Fructose and mannose metabolism 2
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit00541 Biosynthesis of various nucleotide sugars 2
cit01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 3
ppo04120 Ubiquitin mediated proteolysis 3
ppo04141 Protein processing in endoplasmic reticulum 3
ppo01240 Biosynthesis of cofactors 2
ppo03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu03018 RNA degradation 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818655 103866509 103866024 103865823 106391611 107959339 107940480 107916274 102614960 102609366 127898569 100811169 100267229 7479030 11421377 101264723 102583280 107804643 107803566 4332764 100193297 123081923 123092203 123099928 123448700 8083662 100824222 5726092 5725679
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