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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G04480   endoribonuclease 
 ath-r.7   AT3G04480   endoribonuclease 
 ath-m.9   AT3G04480   endoribonuclease 
 ath-e.2   AT3G04480   endoribonuclease 
 ath-m.4.bio   AT3G04480   endoribonuclease 
 ath-m.4.hor   AT3G04480   endoribonuclease 
 ath-m.4.lig   AT3G04480   endoribonuclease 
 ath-m.4.str   AT3G04480   endoribonuclease 
 ath-m.4.tis   AT3G04480   endoribonuclease 
 bra-r.6   103848915   diphthine--ammonia ligase 
 bra-r.6   103859035   diphthine--ammonia ligase 
 bna-r.1   106447631   diphthine--ammonia ligase 
 bna-r.1   125587671   diphthine--ammonia ligase-like 
 bna-r.1   106438981   diphthine--ammonia ligase-like 
 ghi-r.1   107926823   diphthine--ammonia ligase 
 ghi-r.1   107892726   diphthine--ammonia ligase 
 cit-r.1   102624743   diphthine--ammonia ligase 
 gma-u.5   100807009   diphthine--ammonia ligase 
 vvi-u.5   100244247   diphthine--ammonia ligase 
 ppo-u.5   7487187   diphthine--ammonia ligase 
 ppo-u.5   7487708   diphthine--ammonia ligase 
 mtr-u.5   11425637   diphthine--ammonia ligase 
 sly-u.5   101245449   diphthine--ammonia ligase 
 sot-r.1   102584229   diphthine--ammonia ligase-like 
 nta-r.1   107831427   diphthine--ammonia ligase 
 nta-r.1   107810033   diphthine--ammonia ligase 
 osa-u.5   9270287   diphthine--ammonia ligase 
 zma-u.5   103627881   diphthine--ammonia ligase 
 tae-r.2   123146059   diphthine--ammonia ligase 
 tae-r.2   123139472   diphthine--ammonia ligase 
 tae-r.2   123128904   diphthine--ammonia ligase 
 hvu-r.1   123401748   diphthine--ammonia ligase 
 sbi-r.1   110434488   diphthine--ammonia ligase 
 bdi-r.1   100838496   diphthine--ammonia ligase 
 cre-r.1   CHLRE_01g033091v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G04480 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G04480 (ath-u.5 coexpression data)

CoexMap"819604"


athAT3G04480 | Entrez gene ID : 819604      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 1 1 2 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_187098.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3,  nucl_plas 3  (predict for NP_187098.2)
Subcellular
localization
TargetP
scret 5,  other 4  (predict for NP_187098.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G04480
ath-r.7
for
AT3G04480
ath-m.9
for
AT3G04480
ath-e.2
for
AT3G04480
ath-m.4.bio
for
AT3G04480
ath-m.4.hor
for
AT3G04480
ath-m.4.lig
for
AT3G04480
ath-m.4.str
for
AT3G04480
ath-m.4.tis
for
AT3G04480
bra-r.6
for
103848915
bra-r.6
for
103859035
bna-r.1
for
106447631
bna-r.1
for
125587671
bna-r.1
for
106438981
ghi-r.1
for
107926823
ghi-r.1
for
107892726
cit-r.1
for
102624743
gma-u.5
for
100807009
vvi-u.5
for
100244247
ppo-u.5
for
7487187
ppo-u.5
for
7487708
mtr-u.5
for
11425637
sly-u.5
for
101245449
sot-r.1
for
102584229
nta-r.1
for
107831427
nta-r.1
for
107810033
osa-u.5
for
9270287
zma-u.5
for
103627881
tae-r.2
for
123146059
tae-r.2
for
123139472
tae-r.2
for
123128904
hvu-r.1
for
123401748
sbi-r.1
for
110434488
bdi-r.1
for
100838496
cre-r.1
for
CHLRE_01g033091v5


Ortholog ID: 8437
Species ath bra bra bna bna bna ghi ghi cit gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT3G04480 LOC103848915 LOC103859035 LOC106447631 LOC106438981 LOC106349636 LOC107926823 LOC107892726 LOC102624743 LOC100807009 LOC100244247 LOC7487187 LOC7487708 LOC11425637 LOC101245449 LOC102584229 LOC107831427 LOC107810033 LOC9270287 LOC103627881 LOC123146059 LOC123139472 LOC123128904 LOC123401748 LOC110434488 LOC100838496 CHLRE_01g033091v5
Function* endoribonuclease diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase-like diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase-like diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase diphthine--ammonia ligase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 3
bra00970 Aminoacyl-tRNA biosynthesis 2
bra03015 mRNA surveillance pathway 2
bra00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 5
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 5
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 3
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
ppo05100 Bacterial invasion of epithelial cells 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta03018 RNA degradation 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 9
nta00450 Selenocompound metabolism 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa00270 Cysteine and methionine metabolism 2
osa00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi01240 Biosynthesis of cofactors 2
sbi03015 mRNA surveillance pathway 2
sbi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819604 103848915 103859035 106447631 106438981 106349636 107926823 107892726 102624743 100807009 100244247 7487187 7487708 11425637 101245449 102584229 107831427 107810033 9270287 103627881 123146059 123139472 123128904 123401748 110434488 100838496 5715416
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