Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G08960   ARM repeat superfamily protein 
 ath-r.7   AT3G08960   ARM repeat superfamily protein 
 ath-m.9   AT3G08960   ARM repeat superfamily protein 
 ath-e.2   AT3G08960   ARM repeat superfamily protein 
 ath-m.4.bio   AT3G08960   ARM repeat superfamily protein 
 ath-m.4.hor   AT3G08960   ARM repeat superfamily protein 
 ath-m.4.lig   AT3G08960   ARM repeat superfamily protein 
 ath-m.4.str   AT3G08960   ARM repeat superfamily protein 
 ath-m.4.tis   AT3G08960   ARM repeat superfamily protein 
 gma-u.5   100785151   importin-11 
 gma-u.5   100780767   importin-11 
 vvi-u.5   100248949   uncharacterized LOC100248949 
 ppo-u.5   7460368   uncharacterized LOC7460368 
 mtr-u.5   11412327   importin-11 
 sly-u.5   101256320   uncharacterized LOC101256320 
 osa-u.5   4344385   uncharacterized LOC4344385 
 osa-u.5   9271256   uncharacterized LOC9271256 
 zma-u.5   103647957   importin-11 

close


Top 50 coexpressed genes to AT3G08960 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT3G08960 (ath-u.5 coexpression data)

CoexMap"820048"


athAT3G08960 | Entrez gene ID : 820048      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 9 2 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03013 [list] [network] Nucleocytoplasmic transport (105 genes)
GO BP
GO:0006913 [list] [network] nucleocytoplasmic transport  (53 genes)  IGI  
GO:0006955 [list] [network] immune response  (166 genes)  IGI  
GO:0015031 [list] [network] protein transport  (216 genes)  ISS  
GO CC
GO:0031074 [list] [network] nucleocytoplasmic transport complex  (1 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005049 [list] [network] nuclear export signal receptor activity  (6 genes)  IMP  
GO:0031267 [list] [network] small GTPase binding  (17 genes)  IEA  
Protein NP_001319503.1 [sequence] [blastp]
NP_001326132.1 [sequence] [blastp]
NP_187508.5 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_001319503.1)
plas 6,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_001326132.1)
plas 6,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_187508.5)
Subcellular
localization
TargetP
chlo 4  (predict for NP_001319503.1)
chlo 4  (predict for NP_001326132.1)
chlo 4  (predict for NP_187508.5)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G08960

.
ath-r.7
for
AT3G08960

.
ath-m.9
for
AT3G08960

.
ath-e.2
for
AT3G08960

.
ath-m.4.bio
for
AT3G08960

.
ath-m.4.hor
for
AT3G08960

.
ath-m.4.lig
for
AT3G08960

.
ath-m.4.str
for
AT3G08960

.
ath-m.4.tis
for
AT3G08960

.
gma-u.5
for
100785151

.
gma-u.5
for
100780767

.
vvi-u.5
for
100248949

.
ppo-u.5
for
7460368

.
mtr-u.5
for
11412327

.
sly-u.5
for
101256320

.
osa-u.5
for
4344385

.
osa-u.5
for
9271256

.
zma-u.5
for
103647957

.


Ortholog ID: 7201
Species ath gma gma sly osa osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G08960 LOC100780767 LOC100785151 LOC101256320 LOC4344385 LOC9271256 LOC103647957 LOC103870574 LOC103859319 LOC100248949 LOC7460368 LOC11412327 LOC123051401 LOC123187348 LOC123424604 LOC107958050 LOC107891557 LOC106439223 LOC106439224 CHLRE_02g078885v5 LOC8084988 LOC102579595 LOC102616899 LOC100840594 LOC107807441 LOC107817701
Function* ARM repeat superfamily protein importin-11 importin-11 uncharacterized LOC101256320 uncharacterized LOC4344385 uncharacterized LOC9271256 importin-11 importin-11 importin-11 uncharacterized LOC100248949 uncharacterized LOC7460368 importin-11 importin-11 importin-11 importin-11 importin-11 importin-11 importin-11-like importin-11-like uncharacterized protein importin-11 importin-11 uncharacterized LOC102616899 importin-11 uncharacterized LOC107807441 uncharacterized LOC107817701
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 6
gma04120 Ubiquitin mediated proteolysis 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 5
osa04142 Lysosome 3
osa05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 4
osa04141 Protein processing in endoplasmic reticulum 4
osa04145 Phagosome 2
osa04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
bra03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 3
mtr04148 Efferocytosis 2
mtr04144 Endocytosis 2
mtr05100 Bacterial invasion of epithelial cells 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 5
tae04144 Endocytosis 5
tae05100 Bacterial invasion of epithelial cells 5
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 4
bna03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03250 Viral life cycle - HIV-1 2
nta04136 Autophagy - other 2
nta04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03250 Viral life cycle - HIV-1 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820048 100780767 100785151 101256320 4344385 9271256 103647957 103870574 103859319 100248949 7460368 11412327 123051401 123187348 123424604 107958050 107891557 106439223 106439224 5727262 8084988 102579595 102616899 100840594 107807441 107817701
The preparation time of this page was 1.2 [sec].