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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G09480   Histone superfamily protein 
 ath-r.7   AT3G09480   Histone superfamily protein 
 ath-m.9   AT3G09480   Histone superfamily protein 
 ath-e.2   AT3G09480   Histone superfamily protein 
 ath-m.4.bio   AT3G09480   Histone superfamily protein 
 ath-m.4.hor   AT3G09480   Histone superfamily protein 
 ath-m.4.lig   AT3G09480   Histone superfamily protein 
 ath-m.4.str   AT3G09480   Histone superfamily protein 
 ath-m.4.tis   AT3G09480   Histone superfamily protein 
 ath-u.5   HTB11   Histone superfamily protein 
 ath-u.5   HTB1   Histone superfamily protein 
 bra-r.6   103845413   histone H2B.11 
 bra-r.6   103829764   histone H2B.3 
 bra-r.6   103829945   histone H2B.8 
 bna-r.1   106346354   histone H2B.2-like 
 bna-r.1   106347524   histone H2B.7 
 bna-r.1   106352612   histone H2B.3 
 ghi-r.1   107889081   histone H2B-like 
 ghi-r.1   107889080   histone H2B-like 
 ghi-r.1   107963943   histone H2B-like 
 cit-r.1   102629049   histone H2B.3 
 cit-r.1   102624126   histone H2B.4 
 cit-r.1   127902174   histone H2B.3-like 
 gma-u.5   100805396   probable histone H2B.3 
 gma-u.5   100806140   probable histone H2B.3 
 gma-u.5   100817849   probable histone H2B.1 
 vvi-u.5   100263369   histone H2B.3 
 vvi-u.5   100251955   probable histone H2B.1-like 
 ppo-u.5   18097592   histone H2B 
 ppo-u.5   18101997   histone H2B 
 mtr-u.5   11431194   probable histone H2B.3 
 mtr-u.5   25492556   probable histone H2B.1 
 mtr-u.5   11442767   probable histone H2B.1 
 sly-u.5   101245134   histone H2B-like 
 sly-u.5   101253792   probable histone H2B.1 
 sly-u.5   H2B-3   histone H2B.3 
 sot-r.1   102582527   histone H2B.3-like 
 sot-r.1   102585268   histone H2B.3-like 
 sot-r.1   102585943   histone H2B-like 
 nta-r.1   107807323   histone H2B 
 nta-r.1   107815679   putative histone H2B.1 
 nta-r.1   107817295   histone H2B 
 osa-u.5   9268195   uncharacterized LOC9268195 
 osa-u.5   4324504   histone H2B.5 
 osa-u.5   107278608   histone H2B.1 
 zma-u.5   100501458   Histone H2B 
 zma-u.5   100501306   Histone H2B 
 zma-u.5   100274083   uncharacterized LOC100274083 
 tae-r.2   123102000   histone H2B.1-like 
 tae-r.2   123099286   histone H2B.11 
 tae-r.2   123098484   histone H2B.1 
 hvu-r.1   123440449   histone H2B.1-like 
 hvu-r.1   123440491   histone H2B.1-like 
 sbi-r.1   8057774   histone H2B.4 
 sbi-r.1   8071803   histone H2B.5 
 sbi-r.1   8055359   histone H2B.3 
 bdi-r.1   100846031   histone H2B.1 
 bdi-r.1   100823811   histone H2B.1 
 bdi-r.1   100841029   histone H2B.11 
 cre-r.1   CHLRE_06g264800v5   uncharacterized protein 
 cre-r.1   CHLRE_06g264900v5   uncharacterized protein 
 cre-r.1   CHLRE_06g265400v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G09480 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G09480 (ath-u.5 coexpression data)

CoexMap"820105"


athAT3G09480 | Entrez gene ID : 820105      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 3 3 3 3 3 2 2 3 3 3 3 3 3 3 2 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_187559.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_187559.1)
Subcellular
localization
TargetP
other 9  (predict for NP_187559.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G09480
ath-r.7
for
AT3G09480
ath-m.9
for
AT3G09480
ath-e.2
for
AT3G09480
ath-m.4.bio
for
AT3G09480
ath-m.4.hor
for
AT3G09480
ath-m.4.lig
for
AT3G09480
ath-m.4.str
for
AT3G09480
ath-m.4.tis
for
AT3G09480
ath-u.5
for
HTB11
ath-u.5
for
HTB1
bra-r.6
for
103845413
bra-r.6
for
103829764
bra-r.6
for
103829945
bna-r.1
for
106346354
bna-r.1
for
106347524
bna-r.1
for
106352612
ghi-r.1
for
107889081
ghi-r.1
for
107889080
ghi-r.1
for
107963943
cit-r.1
for
102629049
cit-r.1
for
102624126
cit-r.1
for
127902174
gma-u.5
for
100805396
gma-u.5
for
100806140
gma-u.5
for
100817849
vvi-u.5
for
100263369
vvi-u.5
for
100251955
ppo-u.5
for
18097592
ppo-u.5
for
18101997
mtr-u.5
for
11431194
mtr-u.5
for
25492556
mtr-u.5
for
11442767
sly-u.5
for
101245134
sly-u.5
for
101253792
sly-u.5
for
H2B-3
sot-r.1
for
102582527
sot-r.1
for
102585268
sot-r.1
for
102585943
nta-r.1
for
107807323
nta-r.1
for
107815679
nta-r.1
for
107817295
osa-u.5
for
9268195
osa-u.5
for
4324504
osa-u.5
for
107278608
zma-u.5
for
100501458
zma-u.5
for
100501306
zma-u.5
for
100274083
tae-r.2
for
123102000
tae-r.2
for
123099286
tae-r.2
for
123098484
hvu-r.1
for
123440449
hvu-r.1
for
123440491
sbi-r.1
for
8057774
sbi-r.1
for
8071803
sbi-r.1
for
8055359
bdi-r.1
for
100846031
bdi-r.1
for
100823811
bdi-r.1
for
100841029
cre-r.1
for
CHLRE_06g264800v5
cre-r.1
for
CHLRE_06g264900v5
cre-r.1
for
CHLRE_06g265400v5


Ortholog ID: 42
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo mtr mtr mtr sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi bdi cre cre cre
Symbol HTB4 AT2G28720 AT3G53650 LOC103829764 LOC103851535 LOC103841289 LOC106347524 LOC106440705 LOC106405890 LOC107963943 LOC107948824 LOC107963944 LOC102624126 LOC102608311 LOC100805396 LOC111828532 LOC100499734 LOC100263369 LOC100251955 LOC18101340 LOC11431194 LOC25492748 LOC25485824 H2B-1 LOC101267024 LOC102590470 LOC102601239 LOC107057692 LOC107804465 LOC107790383 LOC107777582 LOC107278608 LOC4345904 LOC103647254 LOC103639304 LOC100192792 LOC123143170 LOC123160834 LOC543489 LOC123442703 LOC123442706 LOC123451652 LOC8055359 LOC8072250 LOC100823811 LOC100829959 LOC100844075 CHLRE_17g713450v5 CHLRE_06g275800v5 CHLRE_17g711750v5
Function* Histone superfamily protein Histone superfamily protein Histone superfamily protein histone H2B.3 histone H2B.7 histone H2B.8 histone H2B.7 histone H2B.8 histone H2B.7 histone H2B-like histone H2B-like probable histone H2B.1 histone H2B.4 histone H2B-like probable histone H2B.3 probable histone H2B probable histone H2B.3 histone H2B.3 probable histone H2B.1-like probable histone H2B.3 probable histone H2B.3 probable histone H2B.2 probable histone H2B.3 histone H2B histone H2B.3-like histone H2B-like histone H2B histone H2B.1 histone H2B histone H2B-like histone H2B.3 histone H2B.1 histone H2B.2-like histone H2B.5 histone H2B.1-like Histone H2B histone H2B.3-like histone H2B.3-like histone H2B.1-like histone H2B.4-like histone H2B.4-like histone H2B.4-like histone H2B.3 histone H2B.1 histone H2B.1 histone H2B.1 histone H2B.3 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 5
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
osa00230 Purine metabolism 2
osa00240 Pyrimidine metabolism 2
osa00480 Glutathione metabolism 2
osa01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 3
sbi00230 Purine metabolism 2
sbi00240 Pyrimidine metabolism 2
sbi00480 Glutathione metabolism 2
sbi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
sbi00240 Pyrimidine metabolism 2
sbi00480 Glutathione metabolism 2
sbi01232 Nucleotide metabolism 2
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836113 817421 28719403 103829764 103851535 103841289 106347524 106440705 106405890 107963943 107948824 107963944 102624126 102608311 100805396 111828532 100499734 100263369 100251955 18101340 11431194 25492748 25485824 778282 101267024 102590470 102601239 107057692 107804465 107790383 107777582 107278608 4345904 103647254 103639304 100192792 123143170 123160834 543489 123442703 123442706 123451652 8055359 8072250 100823811 100829959 100844075 5725960 5716755 66056963
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