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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G09580   FAD/NAD(P)-binding oxidoreductase family protein 
 ath-r.7   AT3G09580   FAD/NAD(P)-binding oxidoreductase family protein 
 ath-m.9   AT3G09580   FAD/NAD(P)-binding oxidoreductase family protein 
 ath-e.2   AT3G09580   FAD/NAD(P)-binding oxidoreductase family protein 
 ath-m.4.bio   AT3G09580   FAD/NAD(P)-binding oxidoreductase family protein 
 ath-m.4.hor   AT3G09580   FAD/NAD(P)-binding oxidoreductase family protein 
 ath-m.4.lig   AT3G09580   FAD/NAD(P)-binding oxidoreductase family protein 
 ath-m.4.str   AT3G09580   FAD/NAD(P)-binding oxidoreductase family protein 
 ath-m.4.tis   AT3G09580   FAD/NAD(P)-binding oxidoreductase family protein 
 bra-r.6   103870535   15-cis-phytoene desaturase, chloroplastic/chromoplastic 
 bna-r.1   111206502   15-cis-phytoene desaturase, chloroplastic/chromoplastic 
 bna-r.1   106452751   15-cis-phytoene desaturase, chloroplastic/chromoplastic 
 ghi-r.1   107948100   uncharacterized LOC107948100 
 ghi-r.1   107898085   15-cis-phytoene desaturase, chloroplastic/chromoplastic 
 cit-r.1   102616469   15-cis-phytoene desaturase, chloroplastic/chromoplastic 
 gma-u.5   100812558   15-cis-phytoene desaturase, chloroplastic/chromoplastic 
 vvi-u.5   100264044   15-cis-phytoene desaturase, chloroplastic/chromoplastic 
 ppo-u.5   7496844   15-cis-phytoene desaturase, chloroplastic/chromoplastic 
 mtr-u.5   25493293   15-cis-phytoene desaturase, chloroplastic/chromoplastic 
 sly-u.5   101244544   15-cis-phytoene desaturase, chloroplastic/chromoplastic 
 sot-r.1   102605135   15-cis-phytoene desaturase, chloroplastic/chromoplastic 
 nta-r.1   107827858   15-cis-phytoene desaturase, chloroplastic/chromoplastic-like 
 osa-u.5   4343973   15-cis-phytoene desaturase, chloroplastic/chromoplastic 
 zma-u.5   103633443   coproporphyrinogen III oxidase 
 tae-r.2   123187872   15-cis-phytoene desaturase, chloroplastic/chromoplastic 
 tae-r.2   123052007   coproporphyrinogen III oxidase 
 hvu-r.1   123429665   15-cis-phytoene desaturase, chloroplastic/chromoplastic-like 
 hvu-r.1   123429814   coproporphyrinogen III oxidase-like 
 sbi-r.1   8063500   protoporphyrinogen oxidase 
 bdi-r.1   100829046   protoporphyrinogen oxidase 
 cre-r.1   CHLRE_12g560900v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G09580 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G09580 (ath-u.5 coexpression data)

CoexMap"820115"


athAT3G09580 | Entrez gene ID : 820115      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 1 1 1 1 2 2 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0016491 [list] [network] oxidoreductase activity  (809 genes)  IEA  
Protein NP_187569.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 7,  chlo 3  (predict for NP_187569.1)
Subcellular
localization
TargetP
chlo 5,  mito 5  (predict for NP_187569.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G09580
ath-r.7
for
AT3G09580
ath-m.9
for
AT3G09580
ath-e.2
for
AT3G09580
ath-m.4.bio
for
AT3G09580
ath-m.4.hor
for
AT3G09580
ath-m.4.lig
for
AT3G09580
ath-m.4.str
for
AT3G09580
ath-m.4.tis
for
AT3G09580
bra-r.6
for
103870535
bna-r.1
for
111206502
bna-r.1
for
106452751
ghi-r.1
for
107948100
ghi-r.1
for
107898085
cit-r.1
for
102616469
gma-u.5
for
100812558
vvi-u.5
for
100264044
ppo-u.5
for
7496844
mtr-u.5
for
25493293
sly-u.5
for
101244544
sot-r.1
for
102605135
nta-r.1
for
107827858
osa-u.5
for
4343973
zma-u.5
for
103633443
tae-r.2
for
123187872
tae-r.2
for
123052007
hvu-r.1
for
123429665
hvu-r.1
for
123429814
sbi-r.1
for
8063500
bdi-r.1
for
100829046
cre-r.1
for
CHLRE_12g560900v5


Ortholog ID: 10746
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta osa zma tae tae hvu hvu sbi bdi cre
Symbol AT3G09580 LOC103870535 LOC111206502 LOC106452751 LOC107948100 LOC107898085 LOC102616469 LOC100812558 LOC100264044 LOC7496844 LOC25493293 LOC101244544 LOC102605135 LOC107827858 LOC4343973 LOC103633443 LOC123187872 LOC123052007 LOC123429665 LOC123429814 LOC8063500 LOC100829046 CHLRE_12g560900v5
Function* FAD/NAD(P)-binding oxidoreductase family protein 15-cis-phytoene desaturase, chloroplastic/chromoplastic 15-cis-phytoene desaturase, chloroplastic/chromoplastic 15-cis-phytoene desaturase, chloroplastic/chromoplastic uncharacterized LOC107948100 15-cis-phytoene desaturase, chloroplastic/chromoplastic 15-cis-phytoene desaturase, chloroplastic/chromoplastic 15-cis-phytoene desaturase, chloroplastic/chromoplastic 15-cis-phytoene desaturase, chloroplastic/chromoplastic 15-cis-phytoene desaturase, chloroplastic/chromoplastic 15-cis-phytoene desaturase, chloroplastic/chromoplastic 15-cis-phytoene desaturase, chloroplastic/chromoplastic 15-cis-phytoene desaturase, chloroplastic/chromoplastic 15-cis-phytoene desaturase, chloroplastic/chromoplastic-like 15-cis-phytoene desaturase, chloroplastic/chromoplastic coproporphyrinogen III oxidase 15-cis-phytoene desaturase, chloroplastic/chromoplastic coproporphyrinogen III oxidase 15-cis-phytoene desaturase, chloroplastic/chromoplastic-like coproporphyrinogen III oxidase-like protoporphyrinogen oxidase protoporphyrinogen oxidase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 2
bna04142 Lysosome 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 2
bna04142 Lysosome 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma01240 Biosynthesis of cofactors 4
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi00190 Oxidative phosphorylation 2
vvi00195 Photosynthesis 2
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr00190 Oxidative phosphorylation 2
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 3
zma00195 Photosynthesis 2
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 5
cre00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820115 103870535 111206502 106452751 107948100 107898085 102616469 100812558 100264044 7496844 25493293 101244544 102605135 107827858 4343973 103633443 123187872 123052007 123429665 123429814 8063500 100829046 5728667
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