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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G11890   Sterile alpha motif (SAM) domain-containing protein 
 ath-r.7   AT3G11890   Sterile alpha motif (SAM) domain-containing protein 
 ath-e.2   AT3G11890   Sterile alpha motif (SAM) domain-containing protein 
 bra-r.6   103870303   uncharacterized LOC103870303 
 bna-r.1   106416039   uncharacterized LOC106416039 
 bna-r.1   106452506   titin homolog 
 ghi-r.1   121202965   uncharacterized LOC121202965 
 ghi-r.1   107925639   uncharacterized LOC107925639 
 cit-r.1   102618253   hypothetical protein 
 gma-u.5   100804141   uncharacterized LOC100804141 
 gma-u.5   100785969   uncharacterized LOC100785969 
 vvi-u.5   100246168   uncharacterized LOC100246168 
 mtr-u.5   25499541   uncharacterized LOC25499541 
 sly-u.5   101259114   uncharacterized LOC101259114 
 sot-r.1   102600284   uncharacterized LOC102600284 
 nta-r.1   107796092   uncharacterized LOC107796092 
 nta-r.1   107783382   uncharacterized LOC107783382 
 osa-u.5   4345434   uncharacterized LOC4345434 
 zma-u.5   100382891   Sterile alpha motif (SAM) domain-containing protein 
 tae-r.2   123168737   uncharacterized LOC123168737 
 tae-r.2   123161738   uncharacterized LOC123161738 
 tae-r.2   123161055   uncharacterized LOC123161055 
 hvu-r.1   123412725   uncharacterized LOC123412725 
 sbi-r.1   8070004   uncharacterized LOC8070004 
 bdi-r.1   100826991   uncharacterized LOC100826991 

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Top 50 coexpressed genes to AT3G11890 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G11890 (ath-u.5 coexpression data)

CoexMap"820362"


athAT3G11890 | Entrez gene ID : 820362      
Species ath bra bna ghi cit gma vvi mtr sly sot nta osa zma tae hvu sbi bdi cre ppo
Paralog 3 1 2 2 1 2 1 1 1 1 2 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001326442.1 [sequence] [blastp]
NP_001326443.1 [sequence] [blastp]
NP_001326444.1 [sequence] [blastp]
NP_001326445.1 [sequence] [blastp]
NP_001326446.1 [sequence] [blastp]
NP_566404.1 [sequence] [blastp]
NP_974290.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cysk 1  (predict for NP_001326442.1)
nucl 6,  chlo 1,  cysk 1  (predict for NP_001326443.1)
nucl 6,  chlo 1,  cysk 1  (predict for NP_001326444.1)
nucl 6,  chlo 1,  cysk 1  (predict for NP_001326445.1)
nucl 6,  chlo 1,  cysk 1  (predict for NP_001326446.1)
nucl 6,  chlo 1,  cysk 1  (predict for NP_566404.1)
nucl 6,  chlo 1,  cysk 1  (predict for NP_974290.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for NP_001326442.1)
other 8,  mito 4  (predict for NP_001326443.1)
other 8,  mito 4  (predict for NP_001326444.1)
other 8,  mito 4  (predict for NP_001326445.1)
other 8,  mito 4  (predict for NP_001326446.1)
other 8,  mito 4  (predict for NP_566404.1)
other 8,  mito 4  (predict for NP_974290.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G11890
ath-r.7
for
AT3G11890
ath-e.2
for
AT3G11890
bra-r.6
for
103870303
bna-r.1
for
106416039
bna-r.1
for
106452506
ghi-r.1
for
121202965
ghi-r.1
for
107925639
cit-r.1
for
102618253
gma-u.5
for
100804141
gma-u.5
for
100785969
vvi-u.5
for
100246168
mtr-u.5
for
25499541
sly-u.5
for
101259114
sot-r.1
for
102600284
nta-r.1
for
107796092
nta-r.1
for
107783382
osa-u.5
for
4345434
zma-u.5
for
100382891
tae-r.2
for
123168737
tae-r.2
for
123161738
tae-r.2
for
123161055
hvu-r.1
for
123412725
sbi-r.1
for
8070004
bdi-r.1
for
100826991


Ortholog ID: 9470
Species ath bra bna bna ghi ghi cit gma gma vvi mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT3G11890 LOC103870303 LOC106416039 LOC106452506 LOC121202965 LOC107925639 LOC102618253 LOC100804141 LOC100785969 LOC100246168 LOC25499541 LOC101259114 LOC102600284 LOC107796092 LOC107783382 LOC4345434 LOC100382891 LOC123161738 LOC123161055 LOC123147674 LOC123412725 LOC8070004 LOC100826991
Function* Sterile alpha motif (SAM) domain-containing protein uncharacterized LOC103870303 uncharacterized LOC106416039 titin homolog uncharacterized LOC121202965 uncharacterized LOC107925639 hypothetical protein uncharacterized LOC100804141 uncharacterized LOC100785969 uncharacterized LOC100246168 uncharacterized LOC25499541 uncharacterized LOC101259114 uncharacterized LOC102600284 uncharacterized LOC107796092 uncharacterized LOC107783382 uncharacterized LOC4345434 Sterile alpha motif (SAM) domain-containing protein uncharacterized LOC123161738 uncharacterized LOC123161055 uncharacterized LOC123147674 uncharacterized LOC123412725 uncharacterized LOC8070004 uncharacterized LOC100826991
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra00061 Fatty acid biosynthesis 4
bra01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 4
bna04075 Plant hormone signal transduction 3
bna03082 ATP-dependent chromatin remodeling 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00510 N-Glycan biosynthesis 2
mtr00513 Various types of N-glycan biosynthesis 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820362 103870303 106416039 106452506 121202965 107925639 102618253 100804141 100785969 100246168 25499541 101259114 102600284 107796092 107783382 4345434 100382891 123161738 123161055 123147674 123412725 8070004 100826991
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