Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G12940   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-r.7   AT3G12940   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-m.9   AT3G12940   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-e.2   AT3G12940   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-m.4.bio   AT3G12940   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-m.4.hor   AT3G12940   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-m.4.lig   AT3G12940   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-m.4.str   AT3G12940   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-m.4.tis   AT3G12940   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 bra-r.6   103870208   uncharacterized LOC103870208 
 bna-r.1   BNAA05G26260D   uncharacterized BNAA05G26260D 
 bna-r.1   111211932   uncharacterized LOC111211932 
 ghi-r.1   107941315   uncharacterized LOC107941315 
 ghi-r.1   107932683   uncharacterized LOC107932683 
 ghi-r.1   107962289   uncharacterized LOC107962289 
 cit-r.1   102613563   uncharacterized LOC102613563 
 gma-u.5   100807442   uncharacterized LOC100807442 
 gma-u.5   100788178   uncharacterized LOC100788178 
 vvi-u.5   100255982   uncharacterized LOC100255982 
 ppo-u.5   7489046   uncharacterized LOC7489046 
 mtr-u.5   11408361   uncharacterized LOC11408361 
 sly-u.5   101257983   uncharacterized LOC101257983 
 sot-r.1   102581396   uncharacterized LOC102581396 
 nta-r.1   107802601   uncharacterized LOC107802601 
 nta-r.1   107767995   uncharacterized LOC107767995 
 osa-u.5   4343298   uncharacterized LOC4343298 
 zma-u.5   100193732   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 tae-r.2   123044750   uncharacterized LOC123044750 
 tae-r.2   123052623   uncharacterized LOC123052623 
 sbi-r.1   8077465   uncharacterized LOC8077465 

close


Top 50 coexpressed genes to AT3G12940 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT3G12940 (ath-u.5 coexpression data)

CoexMap"820479"


athAT3G12940 | Entrez gene ID : 820479      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae sbi bdi cre hvu
Paralog 9 1 2 3 1 2 1 1 1 1 1 2 1 1 2 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001326289.1 [sequence] [blastp]
NP_001326290.1 [sequence] [blastp]
NP_187900.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for NP_001326289.1)
nucl 7,  cyto 1,  chlo 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001326290.1)
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for NP_187900.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001326289.1)
mito 5,  other 3  (predict for NP_001326290.1)
other 8  (predict for NP_187900.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G12940
ath-r.7
for
AT3G12940
ath-m.9
for
AT3G12940
ath-e.2
for
AT3G12940
ath-m.4.bio
for
AT3G12940
ath-m.4.hor
for
AT3G12940
ath-m.4.lig
for
AT3G12940
ath-m.4.str
for
AT3G12940
ath-m.4.tis
for
AT3G12940
bra-r.6
for
103870208
bna-r.1
for
BNAA05G26260D
bna-r.1
for
111211932
ghi-r.1
for
107941315
ghi-r.1
for
107932683
ghi-r.1
for
107962289
cit-r.1
for
102613563
gma-u.5
for
100807442
gma-u.5
for
100788178
vvi-u.5
for
100255982
ppo-u.5
for
7489046
mtr-u.5
for
11408361
sly-u.5
for
101257983
sot-r.1
for
102581396
nta-r.1
for
107802601
nta-r.1
for
107767995
osa-u.5
for
4343298
zma-u.5
for
100193732
tae-r.2
for
123044750
tae-r.2
for
123052623
sbi-r.1
for
8077465


Ortholog ID: 11675
Species ath bra bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae sbi
Symbol AT3G12940 LOC103870208 BNAA05G26260D LOC111211932 LOC107941315 LOC107932683 LOC107962289 LOC102613563 LOC100807442 LOC100788178 LOC100255982 LOC7489046 LOC11408361 LOC101257983 LOC102581396 LOC107802601 LOC107767995 LOC4343298 LOC100193732 LOC123044750 LOC123052623 LOC8077465
Function* 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein uncharacterized LOC103870208 uncharacterized BNAA05G26260D uncharacterized LOC111211932 uncharacterized LOC107941315 uncharacterized LOC107932683 uncharacterized LOC107962289 uncharacterized LOC102613563 uncharacterized LOC100807442 uncharacterized LOC100788178 uncharacterized LOC100255982 uncharacterized LOC7489046 uncharacterized LOC11408361 uncharacterized LOC101257983 uncharacterized LOC102581396 uncharacterized LOC107802601 uncharacterized LOC107767995 uncharacterized LOC4343298 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein uncharacterized LOC123044750 uncharacterized LOC123052623 uncharacterized LOC8077465
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00514 Other types of O-glycan biosynthesis 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00514 Other types of O-glycan biosynthesis 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
cit03015 mRNA surveillance pathway 4
cit03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 5
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 4
nta04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04130 SNARE interactions in vesicular transport 2
sbi04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820479 103870208 106452351 111211932 107941315 107932683 107962289 102613563 100807442 100788178 100255982 7489046 11408361 101257983 102581396 107802601 107767995 4343298 100193732 123044750 123052623 8077465
The preparation time of this page was 0.1 [sec].