ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT3G17580	SsrA-binding protein
ath-r.7	AT3G17580	SsrA-binding protein
ath-e.2	AT3G17580	SsrA-binding protein
ath-u.5	AT1G48330	SsrA-binding protein
bra-r.6	103839192	uncharacterized LOC103839192
bra-r.6	103868681	uncharacterized LOC103868681
bna-r.1	106423751	uncharacterized LOC106423751
ghi-r.1	121213732	uncharacterized LOC121213732
gma-u.5	100500568	uncharacterized LOC100500568
gma-u.5	100787873	uncharacterized LOC100787873
gma-u.5	100779101	uncharacterized LOC100779101
ppo-u.5	7496491	uncharacterized LOC7496491
mtr-u.5	11437762	uncharacterized LOC11437762
mtr-u.5	11419573	uncharacterized LOC11419573
sly-u.5	101244773	uncharacterized LOC101244773
osa-u.5	4325150	uncharacterized LOC4325150
osa-u.5	4337748	probable glycosidase CRH2
zma-u.5	103641356	uncharacterized LOC103641356
zma-u.5	100278048	uncharacterized LOC100278048
zma-u.5	103635913	uncharacterized LOC103635913
tae-r.2	123087815	uncharacterized LOC123087815
tae-r.2	123165541	uncharacterized LOC123165541
tae-r.2	123096665	uncharacterized LOC123096665
hvu-r.1	123407042	uncharacterized LOC123407042
bdi-r.1	104582761	uncharacterized LOC104582761

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_188385.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, mito 1

(predict for NP_188385.1)

Subcellular
localization
TargetP

chlo 4

(predict for NP_188385.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT3G17580	ath-r.7 for AT3G17580	ath-e.2 for AT3G17580	ath-u.5 for AT1G48330	bra-r.6 for 103839192	bra-r.6 for 103868681	bna-r.1 for 106423751	ghi-r.1 for 121213732	gma-u.5 for 100500568	gma-u.5 for 100787873	gma-u.5 for 100779101	ppo-u.5 for 7496491	mtr-u.5 for 11437762	mtr-u.5 for 11419573	sly-u.5 for 101244773	osa-u.5 for 4325150	osa-u.5 for 4337748	zma-u.5 for 103641356	zma-u.5 for 100278048	zma-u.5 for 103635913	tae-r.2 for 123087815	tae-r.2 for 123165541	tae-r.2 for 123096665	hvu-r.1 for 123407042	bdi-r.1 for 104582761

Ortholog

Ortholog ID: 4079

Species

ath

bra

bna

ghi

gma

ppo

mtr

sly

osa

zma

tae

hvu

bdi

Symbol

Function^*

SsrA-binding protein

uncharacterized LOC103868681

uncharacterized LOC103833013

uncharacterized LOC106357070

uncharacterized LOC121213732

uncharacterized LOC100500568

uncharacterized LOC100787873

uncharacterized LOC100779101

uncharacterized LOC7496491

uncharacterized LOC11437762

uncharacterized LOC11419573

uncharacterized LOC101244773

uncharacterized LOC4325150

probable glycosidase CRH2

uncharacterized LOC103641356

uncharacterized LOC100278048

uncharacterized LOC103635913

uncharacterized LOC123087815

uncharacterized LOC123165541

uncharacterized LOC123096665

uncharacterized LOC123407042

uncharacterized LOC104582761

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00040	Pentose and glucuronate interconversions	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00062	Fatty acid elongation	3
tae04626	Plant-pathogen interaction	3
tae00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00062	Fatty acid elongation	3
tae04626	Plant-pathogen interaction	3
tae00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01040	Biosynthesis of unsaturated fatty acids	2
bdi01212	Fatty acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

821024

841253

103868681

103833013

106357070

121213732

100500568

100787873

100779101

7496491

11437762

11419573

101244773

4325150

4337748

103641356

100278048

103635913

123087815

123165541

123096665

123407042

104582761

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT3G17580 (ath-u.5 coexpression data)

Top 50 enrichment test to AT3G17580 (ath-u.5 coexpression data)


Species	ath	bra	bna	ghi	gma	ppo	mtr	sly	osa	zma	tae	hvu	bdi	sbi	cre	cit	sot	nta	vvi
Paralog	4	2	1	1	3	1	2	1	2	3	3	1	1	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G17580 (ath-u.5 coexpression data)

Top 50 enrichment test to AT3G17580 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**