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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   BSH   transcription regulatory protein SNF5, putative (BSH) 
 ath-r.7   BSH   transcription regulatory protein SNF5, putative (BSH) 
 ath-m.9   BSH   transcription regulatory protein SNF5, putative (BSH) 
 ath-e.2   BSH   transcription regulatory protein SNF5, putative (BSH) 
 ath-m.4.bio   BSH   transcription regulatory protein SNF5, putative (BSH) 
 ath-m.4.hor   BSH   transcription regulatory protein SNF5, putative (BSH) 
 ath-m.4.lig   BSH   transcription regulatory protein SNF5, putative (BSH) 
 ath-m.4.str   BSH   transcription regulatory protein SNF5, putative (BSH) 
 ath-m.4.tis   BSH   transcription regulatory protein SNF5, putative (BSH) 
 gma-u.5   SNF5   chromatin structure-remodeling complex protein BSH-like 
 vvi-u.5   100249448   chromatin structure-remodeling complex protein BSH 
 ppo-u.5   7496492   chromatin structure-remodeling complex protein BSH 
 mtr-u.5   11438224   chromatin structure-remodeling complex protein BSH 
 sly-u.5   101255453   chromatin structure-remodeling complex protein BSH 
 osa-u.5   4330573   chromatin structure-remodeling complex protein BSH 
 zma-u.5   100191936   SWI/SNF, matrix-associated, actin-dependent regulator of chromatin subfamily B member 1 

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Top 50 coexpressed genes to BSH (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to BSH (ath-u.5 coexpression data)

CoexMap"821025"


athBSH | Entrez gene ID : 821025      
Species ath gma vvi ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 9 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03082 [list] [network] ATP-dependent chromatin remodeling (64 genes)
ath03250 [list] [network] Viral life cycle - HIV-1 (39 genes)
GO BP
GO:0006338 [list] [network] chromatin remodeling  (210 genes)  ISS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0003682 [list] [network] chromatin binding  (103 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001189918.1 [sequence] [blastp]
NP_001326663.1 [sequence] [blastp]
NP_566581.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  mito 3,  chlo_mito 3,  nucl 2  (predict for NP_001189918.1)
chlo 3,  nucl 3,  cyto 1,  mito 1,  cysk_nucl 1  (predict for NP_001326663.1)
chlo 4,  cyto 2,  mito 2,  nucl 1,  mito_plas 1,  cyto_plas 1  (predict for NP_566581.1)
Subcellular
localization
TargetP
mito 8,  other 3  (predict for NP_001189918.1)
mito 5,  other 5  (predict for NP_001326663.1)
mito 5,  other 5  (predict for NP_566581.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
BSH

.
ath-r.7
for
BSH

.
ath-m.9
for
BSH

.
ath-e.2
for
BSH

.
ath-m.4.bio
for
BSH

.
ath-m.4.hor
for
BSH

.
ath-m.4.lig
for
BSH

.
ath-m.4.str
for
BSH

.
ath-m.4.tis
for
BSH

.
gma-u.5
for
SNF5

.
vvi-u.5
for
100249448

.
ppo-u.5
for
7496492

.
mtr-u.5
for
11438224

.
sly-u.5
for
101255453

.
osa-u.5
for
4330573

.
zma-u.5
for
100191936

.


Ortholog ID: 7574
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol BSH SNF5 LOC101255453 LOC4330573 LOC100191936 LOC103869676 LOC100249448 LOC7496492 LOC11438224 LOC123190533 LOC123110967 LOC123423952 LOC107886895 LOC107907386 LOC125609009 LOC106345287 CHLRE_14g619613v5 LOC8068206 LOC102582388 LOC102584822 LOC102630390 LOC100837874 LOC107765782 LOC107766183
Function* transcription regulatory protein SNF5, putative (BSH) chromatin structure-remodeling complex protein BSH-like chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH SWI/SNF, matrix-associated, actin-dependent regulator of chromatin subfamily B member 1 chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH uncharacterized protein chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH-like chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH chromatin structure-remodeling complex protein BSH
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03040 Spliceosome 3
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly03420 Nucleotide excision repair 3
sly03440 Homologous recombination 2
sly03040 Spliceosome 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03082 ATP-dependent chromatin remodeling 3
bna03250 Viral life cycle - HIV-1 3
bna00270 Cysteine and methionine metabolism 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03082 ATP-dependent chromatin remodeling 3
bna03250 Viral life cycle - HIV-1 3
bna00270 Cysteine and methionine metabolism 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 2
sbi03030 DNA replication 2
sbi03082 ATP-dependent chromatin remodeling 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot03082 ATP-dependent chromatin remodeling 2
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
cit03060 Protein export 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03250 Viral life cycle - HIV-1 2
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03250 Viral life cycle - HIV-1 2
nta04136 Autophagy - other 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821025 100818624 101255453 4330573 100191936 103869676 100249448 7496492 11438224 123190533 123110967 123423952 107886895 107907386 125609009 106345287 5715878 8068206 102582388 102584822 102630390 100837874 107765782 107766183
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