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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G18060   transducin family protein / WD-40 repeat family protein 
 ath-r.7   AT3G18060   transducin family protein / WD-40 repeat family protein 
 ath-m.9   AT3G18060   transducin family protein / WD-40 repeat family protein 
 ath-e.2   AT3G18060   transducin family protein / WD-40 repeat family protein 
 ath-m.4.bio   AT3G18060   transducin family protein / WD-40 repeat family protein 
 ath-m.4.hor   AT3G18060   transducin family protein / WD-40 repeat family protein 
 ath-m.4.lig   AT3G18060   transducin family protein / WD-40 repeat family protein 
 ath-m.4.str   AT3G18060   transducin family protein / WD-40 repeat family protein 
 ath-m.4.tis   AT3G18060   transducin family protein / WD-40 repeat family protein 
 ath-u.5   AT2G01330   nucleotide binding protein 
 bra-r.6   103869613   actin-interacting protein 1-2 
 bna-r.1   111202857   actin-interacting protein 1-2-like 
 bna-r.1   125608987   actin-interacting protein 1-2 
 bna-r.1   106432052   actin-interacting protein 1-1-like 
 ghi-r.1   107923817   actin-interacting protein 1-2 
 ghi-r.1   107921291   actin-interacting protein 1-2 
 ghi-r.1   107916902   actin-interacting protein 1-2 
 cit-r.1   102612933   actin-interacting protein 1-2 
 cit-r.1   102624015   actin-interacting protein 1-1 
 gma-u.5   100805073   actin-interacting protein 1-2 
 gma-u.5   100798693   actin-interacting protein 1-2 
 gma-u.5   100794702   actin-interacting protein 1-2 
 vvi-u.5   100266198   actin-interacting protein 1-2 
 ppo-u.5   7486737   actin-interacting protein 1-2 
 ppo-u.5   7462478   actin-interacting protein 1-2 
 mtr-u.5   11408117   actin-interacting protein 1-2 
 sly-u.5   101267214   actin-interacting protein 1-2 
 sot-r.1   102580136   66 kDa stress protein 
 nta-r.1   107797995   actin-interacting protein 1-2 
 nta-r.1   107811990   actin-interacting protein 1-2 
 osa-u.5   4326007   actin-interacting protein 1-2 
 zma-u.5   100192950   Actin-interacting protein 1-2 
 zma-u.5   100382413   Actin-interacting protein 1-2 
 tae-r.2   123076868   actin-interacting protein 1-2 
 tae-r.2   123068316   actin-interacting protein 1-2 
 tae-r.2   123059978   actin-interacting protein 1-2 
 hvu-r.1   123442462   actin-interacting protein 1-2 
 sbi-r.1   8070405   actin-interacting protein 1-2 
 bdi-r.1   100844672   actin-interacting protein 1-2 

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Top 50 coexpressed genes to AT3G18060 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G18060 (ath-u.5 coexpression data)

CoexMap"821331"


athAT3G18060 | Entrez gene ID : 821331      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 1 3 3 2 3 1 2 1 1 1 2 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  ISS  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_188434.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  E.R. 1,  chlo 1,  nucl 1,  vacu 1,  E.R._plas 1  (predict for NP_188434.2)
Subcellular
localization
TargetP
other 8  (predict for NP_188434.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G18060
ath-r.7
for
AT3G18060
ath-m.9
for
AT3G18060
ath-e.2
for
AT3G18060
ath-m.4.bio
for
AT3G18060
ath-m.4.hor
for
AT3G18060
ath-m.4.lig
for
AT3G18060
ath-m.4.str
for
AT3G18060
ath-m.4.tis
for
AT3G18060
ath-u.5
for
AT2G01330
bra-r.6
for
103869613
bna-r.1
for
111202857
bna-r.1
for
125608987
bna-r.1
for
106432052
ghi-r.1
for
107923817
ghi-r.1
for
107921291
ghi-r.1
for
107916902
cit-r.1
for
102612933
cit-r.1
for
102624015
gma-u.5
for
100805073
gma-u.5
for
100798693
gma-u.5
for
100794702
vvi-u.5
for
100266198
ppo-u.5
for
7486737
ppo-u.5
for
7462478
mtr-u.5
for
11408117
sly-u.5
for
101267214
sot-r.1
for
102580136
nta-r.1
for
107797995
nta-r.1
for
107811990
osa-u.5
for
4326007
zma-u.5
for
100192950
zma-u.5
for
100382413
tae-r.2
for
123076868
tae-r.2
for
123068316
tae-r.2
for
123059978
hvu-r.1
for
123442462
sbi-r.1
for
8070405
bdi-r.1
for
100844672


Ortholog ID: 5673
Species ath ath bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol AT3G18060 AT2G01330 LOC103869613 LOC111202857 LOC125608987 LOC106432052 LOC107923817 LOC107921291 LOC107916902 LOC102612933 LOC102624015 LOC100805073 LOC100798693 LOC100794702 LOC100266198 LOC7486737 LOC7462478 LOC11408117 LOC101267214 LOC102580136 LOC107797995 LOC107811990 LOC4326007 LOC100192950 LOC100382413 LOC123076868 LOC123068316 LOC123059978 LOC123442462 LOC8070405 LOC100844672
Function* transducin family protein / WD-40 repeat family protein nucleotide binding protein actin-interacting protein 1-2 actin-interacting protein 1-2-like actin-interacting protein 1-2 actin-interacting protein 1-1-like actin-interacting protein 1-2 actin-interacting protein 1-2 actin-interacting protein 1-2 actin-interacting protein 1-2 actin-interacting protein 1-1 actin-interacting protein 1-2 actin-interacting protein 1-2 actin-interacting protein 1-2 actin-interacting protein 1-2 actin-interacting protein 1-2 actin-interacting protein 1-2 actin-interacting protein 1-2 actin-interacting protein 1-2 66 kDa stress protein actin-interacting protein 1-2 actin-interacting protein 1-2 actin-interacting protein 1-2 Actin-interacting protein 1-2 Actin-interacting protein 1-2 actin-interacting protein 1-2 actin-interacting protein 1-2 actin-interacting protein 1-2 actin-interacting protein 1-2 actin-interacting protein 1-2 actin-interacting protein 1-2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 11
ath04145 Phagosome 11
ath04142 Lysosome 4
ath04141 Protein processing in endoplasmic reticulum 3
ath00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 5
ghi03015 mRNA surveillance pathway 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit00510 N-Glycan biosynthesis 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 3
ppo00330 Arginine and proline metabolism 3
ppo00053 Ascorbate and aldarate metabolism 2
ppo00071 Fatty acid degradation 2
ppo00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr00010 Glycolysis / Gluconeogenesis 2
mtr01200 Carbon metabolism 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
sly04145 Phagosome 4
sly04142 Lysosome 3
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot04142 Lysosome 2
sot04144 Endocytosis 2
sot05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 4
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 6
osa00020 Citrate cycle (TCA cycle) 5
osa01200 Carbon metabolism 5
osa01210 2-Oxocarboxylic acid metabolism 5
osa01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 3
zma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 2
zma03013 Nucleocytoplasmic transport 2
zma00561 Glycerolipid metabolism 2
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 4
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 4
sbi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821331 814661 103869613 111202857 125608987 106432052 107923817 107921291 107916902 102612933 102624015 100805073 100798693 100794702 100266198 7486737 7462478 11408117 101267214 102580136 107797995 107811990 4326007 100192950 100382413 123076868 123068316 123059978 123442462 8070405 100844672
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