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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G18930   RING/U-box superfamily protein 
 ath-r.7   AT3G18930   RING/U-box superfamily protein 
 ath-m.9   AT3G18930   RING/U-box superfamily protein 
 ath-e.2   AT3G18930   RING/U-box superfamily protein 
 ath-m.4.bio   AT3G18930   RING/U-box superfamily protein 
 ath-m.4.hor   AT3G18930   RING/U-box superfamily protein 
 ath-m.4.lig   AT3G18930   RING/U-box superfamily protein 
 ath-m.4.str   AT3G18930   RING/U-box superfamily protein 
 ath-m.4.tis   AT3G18930   RING/U-box superfamily protein 
 bra-r.6   103869511   RING-H2 finger protein ATL65 
 bna-r.1   125604359   RING-H2 finger protein ATL65-like 
 bna-r.1   106446852   RING-H2 finger protein ATL65-like 
 bna-r.1   106381234   RING-H2 finger protein ATL65 
 ghi-r.1   107925461   RING-H2 finger protein ATL65 
 ghi-r.1   107922396   RING-H2 finger protein ATL65-like 
 cit-r.1   102614935   RING-H2 finger protein ATL65 
 gma-u.5   100795347   RING-H2 finger protein ATL65 
 gma-u.5   100806115   RING-H2 finger protein ATL65 
 vvi-u.5   100262245   RING-H2 finger protein ATL65 
 ppo-u.5   7457503   RING-H2 finger protein ATL65 
 mtr-u.5   11423656   RING-H2 finger protein ATL65 
 sly-u.5   101260183   RING-H2 finger protein ATL65 
 sot-r.1   102590296   RING-H2 finger protein ATL65 
 nta-r.1   107779594   RING-H2 finger protein ATL65-like 
 nta-r.1   107762355   RING-H2 finger protein ATL65 
 zma-u.5   103650460   RING-H2 finger protein ATL65 
 zma-u.5   103640533   RING-H2 finger protein ATL65-like 
 tae-r.2   123119531   RING-H2 finger protein ATL65 
 tae-r.2   123110519   RING-H2 finger protein ATL65 
 tae-r.2   123102346   RING-H2 finger protein ATL65 
 hvu-r.1   123395370   RING-H2 finger protein ATL65 
 sbi-r.1   8076628   RING-H2 finger protein ATL65 
 bdi-r.1   100846241   RING-H2 finger protein ATL65 

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Top 50 coexpressed genes to AT3G18930 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G18930 (ath-u.5 coexpression data)

CoexMap"821425"


athAT3G18930 | Entrez gene ID : 821425      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta zma tae hvu sbi bdi cre osa
Paralog 9 1 3 2 1 2 1 1 1 1 1 2 2 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0031982 [list] [network] vesicle  (608 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001327213.1 [sequence] [blastp]
NP_188523.1 [sequence] [blastp]
NP_974336.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  cysk_nucl 1,  mito 1,  plas 1,  E.R. 1,  E.R._plas 1,  mito_plas 1  (predict for NP_001327213.1)
chlo 6,  nucl 1,  cysk_nucl 1,  mito 1,  plas 1,  E.R. 1,  E.R._plas 1,  mito_plas 1  (predict for NP_188523.1)
chlo 6,  nucl 1,  cysk_nucl 1,  mito 1,  plas 1,  E.R. 1,  E.R._plas 1,  mito_plas 1  (predict for NP_974336.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for NP_001327213.1)
other 4,  chlo 3  (predict for NP_188523.1)
other 4,  chlo 3  (predict for NP_974336.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G18930
ath-r.7
for
AT3G18930
ath-m.9
for
AT3G18930
ath-e.2
for
AT3G18930
ath-m.4.bio
for
AT3G18930
ath-m.4.hor
for
AT3G18930
ath-m.4.lig
for
AT3G18930
ath-m.4.str
for
AT3G18930
ath-m.4.tis
for
AT3G18930
bra-r.6
for
103869511
bna-r.1
for
125604359
bna-r.1
for
106446852
bna-r.1
for
106381234
ghi-r.1
for
107925461
ghi-r.1
for
107922396
cit-r.1
for
102614935
gma-u.5
for
100795347
gma-u.5
for
100806115
vvi-u.5
for
100262245
ppo-u.5
for
7457503
mtr-u.5
for
11423656
sly-u.5
for
101260183
sot-r.1
for
102590296
nta-r.1
for
107779594
nta-r.1
for
107762355
zma-u.5
for
103650460
zma-u.5
for
103640533
tae-r.2
for
123119531
tae-r.2
for
123110519
tae-r.2
for
123102346
hvu-r.1
for
123395370
sbi-r.1
for
8076628
bdi-r.1
for
100846241


Ortholog ID: 8948
Species ath bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta zma zma tae tae tae hvu sbi bdi
Symbol AT3G18930 LOC103869511 LOC125604359 LOC106446852 LOC106381234 LOC107925461 LOC107922396 LOC102614935 LOC100795347 LOC100806115 LOC100262245 LOC7457503 LOC11423656 LOC101260183 LOC102590296 LOC107779594 LOC107762355 LOC103650460 LOC103640533 LOC123119531 LOC123110519 LOC123102346 LOC123395370 LOC8076628 LOC100846241
Function* RING/U-box superfamily protein RING-H2 finger protein ATL65 RING-H2 finger protein ATL65-like RING-H2 finger protein ATL65-like RING-H2 finger protein ATL65 RING-H2 finger protein ATL65 RING-H2 finger protein ATL65-like RING-H2 finger protein ATL65 RING-H2 finger protein ATL65 RING-H2 finger protein ATL65 RING-H2 finger protein ATL65 RING-H2 finger protein ATL65 RING-H2 finger protein ATL65 RING-H2 finger protein ATL65 RING-H2 finger protein ATL65 RING-H2 finger protein ATL65-like RING-H2 finger protein ATL65 RING-H2 finger protein ATL65 RING-H2 finger protein ATL65-like RING-H2 finger protein ATL65 RING-H2 finger protein ATL65 RING-H2 finger protein ATL65 RING-H2 finger protein ATL65 RING-H2 finger protein ATL65 RING-H2 finger protein ATL65
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 3
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 5
ghi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00062 Fatty acid elongation 3
gma04626 Plant-pathogen interaction 3
gma00561 Glycerolipid metabolism 2
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 3
gma04981 Folate transport and metabolism 3
gma00062 Fatty acid elongation 3
gma04626 Plant-pathogen interaction 3
gma00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00770 Pantothenate and CoA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821425 103869511 125604359 106446852 106381234 107925461 107922396 102614935 100795347 100806115 100262245 7457503 11423656 101260183 102590296 107779594 107762355 103650460 103640533 123119531 123110519 123102346 123395370 8076628 100846241
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