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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   SCO2   protein disulfide isomerase 
 ath-r.7   SCO2   protein disulfide isomerase 
 ath-m.9   SCO2   protein disulfide isomerase 
 ath-e.2   SCO2   protein disulfide isomerase 
 ath-m.4.bio   SCO2   protein disulfide isomerase 
 ath-m.4.hor   SCO2   protein disulfide isomerase 
 ath-m.4.lig   SCO2   protein disulfide isomerase 
 ath-m.4.str   SCO2   protein disulfide isomerase 
 ath-m.4.tis   SCO2   protein disulfide isomerase 
 bra-r.6   103869482   protein disulfide-isomerase SCO2 
 bna-r.1   111215668   protein disulfide-isomerase SCO2 
 bna-r.1   125609553   protein disulfide-isomerase SCO2-like 
 bna-r.1   106451900   protein disulfide-isomerase SCO2 
 ghi-r.1   107894260   protein disulfide-isomerase SCO2 
 ghi-r.1   107894259   protein disulfide-isomerase SCO2 
 cit-r.1   102614664   protein disulfide-isomerase SCO2 
 gma-u.5   100819362   uncharacterized LOC100819362 
 vvi-u.5   100854865   protein disulfide-isomerase SCO2 
 ppo-u.5   7457529   protein disulfide-isomerase SCO2 
 mtr-u.5   25493034   protein disulfide-isomerase SCO2 
 sly-u.5   101260586   protein disulfide-isomerase SCO2 
 sot-r.1   102599408   protein disulfide-isomerase SCO2-like 
 sot-r.1   102597073   protein disulfide-isomerase SCO2 
 nta-r.1   107767348   protein disulfide-isomerase SCO2 
 nta-r.1   107792966   calmodulin-like protein 30 
 nta-r.1   107766936   protein disulfide-isomerase SCO2 
 osa-u.5   4347271   protein disulfide-isomerase SCO2 
 zma-u.5   100277018   uncharacterized LOC100277018 
 tae-r.2   123103970   protein disulfide-isomerase SCO2 
 tae-r.2   123112216   protein disulfide-isomerase SCO2 
 tae-r.2   123121736   protein disulfide-isomerase SCO2 
 hvu-r.1   123398682   protein disulfide-isomerase SCO2 
 sbi-r.1   8063705   protein disulfide-isomerase SCO2 
 bdi-r.1   100846859   protein disulfide-isomerase SCO2 
 cre-r.1   CHLRE_07g339200v5   uncharacterized protein 

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Top 50 coexpressed genes to SCO2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SCO2 (ath-u.5 coexpression data)

CoexMap"821456"


athSCO2 | Entrez gene ID : 821456    
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 3 2 1 1 1 1 1 1 2 3 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009658 [list] [network] chloroplast organization  (197 genes)  IMP  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA ISM  
GO MF
GO:0003756 [list] [network] protein disulfide isomerase activity  (18 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_566627.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for NP_566627.1)
Subcellular
localization
TargetP
mito 8,  chlo 3  (predict for NP_566627.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
SCO2
ath-r.7
for
SCO2
ath-m.9
for
SCO2
ath-e.2
for
SCO2
ath-m.4.bio
for
SCO2
ath-m.4.hor
for
SCO2
ath-m.4.lig
for
SCO2
ath-m.4.str
for
SCO2
ath-m.4.tis
for
SCO2
bra-r.6
for
103869482
bna-r.1
for
111215668
bna-r.1
for
125609553
bna-r.1
for
106451900
ghi-r.1
for
107894260
ghi-r.1
for
107894259
cit-r.1
for
102614664
gma-u.5
for
100819362
vvi-u.5
for
100854865
ppo-u.5
for
7457529
mtr-u.5
for
25493034
sly-u.5
for
101260586
sot-r.1
for
102599408
sot-r.1
for
102597073
nta-r.1
for
107767348
nta-r.1
for
107792966
nta-r.1
for
107766936
osa-u.5
for
4347271
zma-u.5
for
100277018
tae-r.2
for
123103970
tae-r.2
for
123112216
tae-r.2
for
123121736
hvu-r.1
for
123398682
sbi-r.1
for
8063705
bdi-r.1
for
100846859
cre-r.1
for
CHLRE_07g339200v5


Ortholog ID: 8949
Species ath bra bna bna bna ghi ghi cit gma vvi ppo mtr sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol SCO2 LOC103869482 LOC111215668 LOC125609553 LOC106451900 LOC107894260 LOC107894259 LOC102614664 LOC100819362 LOC100854865 LOC7457529 LOC25493034 LOC101260586 LOC102599408 LOC102597073 LOC107767348 LOC107792966 LOC107766936 LOC4347271 LOC100277018 LOC123103970 LOC123112216 LOC123121736 LOC123398682 LOC8063705 LOC100846859 CHLRE_07g339200v5
Function* protein disulfide isomerase protein disulfide-isomerase SCO2 protein disulfide-isomerase SCO2 protein disulfide-isomerase SCO2-like protein disulfide-isomerase SCO2 protein disulfide-isomerase SCO2 protein disulfide-isomerase SCO2 protein disulfide-isomerase SCO2 uncharacterized LOC100819362 protein disulfide-isomerase SCO2 protein disulfide-isomerase SCO2 protein disulfide-isomerase SCO2 protein disulfide-isomerase SCO2 protein disulfide-isomerase SCO2-like protein disulfide-isomerase SCO2 protein disulfide-isomerase SCO2 calmodulin-like protein 30 protein disulfide-isomerase SCO2 protein disulfide-isomerase SCO2 uncharacterized LOC100277018 protein disulfide-isomerase SCO2 protein disulfide-isomerase SCO2 protein disulfide-isomerase SCO2 protein disulfide-isomerase SCO2 protein disulfide-isomerase SCO2 protein disulfide-isomerase SCO2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma00061 Fatty acid biosynthesis 2
gma00220 Arginine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00740 Riboflavin metabolism 2
sly00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 4
sot00860 Porphyrin metabolism 3
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00073 Cutin, suberine and wax biosynthesis 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00785 Lipoic acid metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00190 Oxidative phosphorylation 2
tae04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae04145 Phagosome 3
tae00785 Lipoic acid metabolism 3
tae01240 Biosynthesis of cofactors 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 5
tae04145 Phagosome 3
tae00785 Lipoic acid metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 3
bdi00920 Sulfur metabolism 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 2
cre01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821456 103869482 111215668 125609553 106451900 107894260 107894259 102614664 100819362 100854865 7457529 25493034 101260586 102599408 102597073 107767348 107792966 107766936 4347271 100277018 123103970 123112216 123121736 123398682 8063705 100846859 5718089
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