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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   MSH7   MUTS homolog 7 
 ath-r.7   MSH7   MUTS homolog 7 
 ath-m.9   MSH7   MUTS homolog 7 
 ath-e.2   MSH7   MUTS homolog 7 
 ath-m.4.bio   MSH7   MUTS homolog 7 
 ath-m.4.hor   MSH7   MUTS homolog 7 
 ath-m.4.lig   MSH7   MUTS homolog 7 
 ath-m.4.str   MSH7   MUTS homolog 7 
 ath-m.4.tis   MSH7   MUTS homolog 7 
 gma-u.5   100818859   DNA mismatch repair protein MSH7 
 gma-u.5   100776965   DNA mismatch repair protein MSH7 
 vvi-u.5   MSH7   DNA mismatch repair protein Msh6-2 
 mtr-u.5   11436735   DNA mismatch repair protein MSH7 
 sly-u.5   100462656   mismatch repair protein 
 osa-u.5   4325353   DNA mismatch repair protein MSH7 
 zma-u.5   542006   MutS homolog 2 

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Top 50 coexpressed genes to MSH7 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MSH7 (ath-u.5 coexpression data)

CoexMap"822040"


athMSH7 | Entrez gene ID : 822040      
Species ath gma vvi mtr sly osa zma sot hvu tae cit sbi ppo ghi cre bna nta bdi bra
Paralog 9 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03430 [list] [network] Mismatch repair (32 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001326470.1 [sequence] [blastp]
NP_850630.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1  (predict for NP_001326470.1)
chlo 9,  nucl 1  (predict for NP_850630.1)
Subcellular
localization
TargetP
mito 6  (predict for NP_001326470.1)
mito 6  (predict for NP_850630.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
MSH7

.
ath-r.7
for
MSH7

.
ath-m.9
for
MSH7

.
ath-e.2
for
MSH7

.
ath-m.4.bio
for
MSH7

.
ath-m.4.hor
for
MSH7

.
ath-m.4.lig
for
MSH7

.
ath-m.4.str
for
MSH7

.
ath-m.4.tis
for
MSH7

.
gma-u.5
for
100818859

.
gma-u.5
for
100776965

.
vvi-u.5
for
MSH7

.
mtr-u.5
for
11436735

.
sly-u.5
for
100462656

.
osa-u.5
for
4325353

.
zma-u.5
for
542006

.


Ortholog ID: 10111
Species ath gma gma sly osa zma bra vvi mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol MSH7 LOC100776965 LOC100818859 LOC100462656 LOC4325353 LOC542006 LOC103831716 MSH7 LOC11436735 LOC123068987 LOC542874 LOC123442967 LOC107901218 LOC107962662 LOC106391373 LOC106432426 LOC8056514 LOC102603118 LOC102617856 LOC100837570 LOC107823139 LOC107810164
Function* MUTS homolog 7 DNA mismatch repair protein MSH7 DNA mismatch repair protein MSH7 mismatch repair protein DNA mismatch repair protein MSH7 MutS homolog 2 DNA mismatch repair protein MSH7 DNA mismatch repair protein Msh6-2 DNA mismatch repair protein MSH7 DNA mismatch repair protein MSH7 DNA mismatch repair protein MSH7 DNA mismatch repair protein MSH7 DNA mismatch repair protein MSH7 DNA mismatch repair protein MSH7 DNA mismatch repair protein MSH7-like DNA mismatch repair protein MSH7 DNA mismatch repair protein MSH7 DNA mismatch repair protein MSH7 DNA mismatch repair protein MSH7 DNA mismatch repair protein MSH7 DNA mismatch repair protein MSH7-like DNA mismatch repair protein MSH7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 11
ath03420 Nucleotide excision repair 4
ath03430 Mismatch repair 4
ath03440 Homologous recombination 3
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
gma03430 Mismatch repair 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 9
gma03430 Mismatch repair 4
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
sly04120 Ubiquitin mediated proteolysis 2
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 4
zma03030 DNA replication 3
zma03410 Base excision repair 3
zma03420 Nucleotide excision repair 3
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 5
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 11
vvi03410 Base excision repair 4
vvi03420 Nucleotide excision repair 4
vvi03430 Mismatch repair 4
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 10
mtr03430 Mismatch repair 3
mtr03420 Nucleotide excision repair 2
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 8
tae03030 DNA replication 6
tae00270 Cysteine and methionine metabolism 4
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 8
tae03430 Mismatch repair 3
tae00270 Cysteine and methionine metabolism 3
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 5
ghi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 5
ghi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 9
bna03430 Mismatch repair 6
bna03410 Base excision repair 4
bna03420 Nucleotide excision repair 4
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 9
bna03430 Mismatch repair 6
bna03410 Base excision repair 4
bna03420 Nucleotide excision repair 4
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 7
sbi03430 Mismatch repair 3
sbi03420 Nucleotide excision repair 2
sbi03440 Homologous recombination 2
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 4
bdi03430 Mismatch repair 3
bdi03082 ATP-dependent chromatin remodeling 2
bdi03440 Homologous recombination 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822040 100776965 100818859 100462656 4325353 542006 103831716 100260983 11436735 123068987 542874 123442967 107901218 107962662 106391373 106432426 8056514 102603118 102617856 100837570 107823139 107810164
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