ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	FER	Malectin/receptor-like protein kinase family protein
ath-r.7	FER	Malectin/receptor-like protein kinase family protein
ath-m.9	FER	Malectin/receptor-like protein kinase family protein
ath-e.2	FER	Malectin/receptor-like protein kinase family protein
ath-m.4.bio	FER	Malectin/receptor-like protein kinase family protein
ath-m.4.hor	FER	Malectin/receptor-like protein kinase family protein
ath-m.4.lig	FER	Malectin/receptor-like protein kinase family protein
ath-m.4.str	FER	Malectin/receptor-like protein kinase family protein
ath-m.4.tis	FER	Malectin/receptor-like protein kinase family protein
bra-r.6	103860712	receptor-like protein kinase FERONIA
bra-r.6	103872330	receptor-like protein kinase FERONIA
bra-r.6	103841079	receptor-like protein kinase FERONIA
bna-r.1	106448230	receptor-like protein kinase FERONIA
bna-r.1	106437922	receptor-like protein kinase FERONIA
bna-r.1	106367748	receptor-like protein kinase FERONIA
ghi-r.1	107896845	receptor-like protein kinase FERONIA
ghi-r.1	107910653	receptor-like protein kinase FERONIA
ghi-r.1	107912679	receptor-like protein kinase FERONIA
cit-r.1	102620371	receptor-like protein kinase FERONIA
cit-r.1	102610401	receptor-like protein kinase FERONIA
cit-r.1	102613289	receptor-like protein kinase FERONIA
gma-u.5	100526843	receptor-like kinase
gma-u.5	100499644	FERONIA receptor-like kinase
vvi-u.5	100261909	receptor-like protein kinase FERONIA
vvi-u.5	100253138	receptor-like protein kinase FERONIA
vvi-u.5	100246444	receptor-like protein kinase FERONIA
ppo-u.5	18107319	putative receptor-like protein kinase At5g39000
ppo-u.5	7484636	receptor-like protein kinase FERONIA
ppo-u.5	7472486	receptor-like protein kinase FERONIA
mtr-u.5	25498856	receptor-like protein kinase FERONIA
sly-u.5	101255255	receptor-like protein kinase FERONIA
sly-u.5	101259360	receptor-like protein kinase FERONIA
sot-r.1	102605674	receptor-like protein kinase FERONIA
sot-r.1	102588417	receptor-like protein kinase FERONIA
nta-r.1	107810142	receptor-like protein kinase FERONIA
nta-r.1	107806084	receptor-like protein kinase FERONIA
nta-r.1	107799134	receptor-like protein kinase FERONIA
osa-u.5	4332743	receptor-like protein kinase FERONIA
osa-u.5	4338403	receptor-like protein kinase FERONIA
osa-u.5	4325600	receptor-like protein kinase FERONIA
zma-u.5	100274007	Receptor-like protein kinase FERONIA
zma-u.5	103639167	receptor-like protein kinase FERONIA
tae-r.2	123052957	receptor-like protein kinase FERONIA
tae-r.2	123092221	receptor-like protein kinase FERONIA
tae-r.2	123085782	receptor-like protein kinase FERONIA
hvu-r.1	123448715	receptor-like protein kinase FERONIA
hvu-r.1	123400168	receptor-like protein kinase FERONIA
hvu-r.1	123440783	receptor-like protein kinase FERONIA
sbi-r.1	8066853	receptor-like protein kinase FERONIA
sbi-r.1	8082347	receptor-like protein kinase FERONIA
bdi-r.1	100832452	receptor-like protein kinase FERONIA
bdi-r.1	100828225	receptor-like protein kinase FERONIA

Top 50 coexpressed genes to FER (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to FER (ath-u.5 coexpression data)

CoexMap"824318"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0032922 [list] [network] circadian regulation of gene expression	(9 genes)	IEP
GO:0010483 [list] [network] pollen tube reception	(11 genes)	IMP
GO:0030308 [list] [network] negative regulation of cell growth	(13 genes)	IMP
GO:0009788 [list] [network] negative regulation of abscisic acid-activated signaling pathway	(62 genes)	IMP
GO:0010118 [list] [network] stomatal movement	(63 genes)	IGI
GO:0009741 [list] [network] response to brassinosteroid	(101 genes)	IMP
GO:0046777 [list] [network] protein autophosphorylation	(119 genes)	IDA
GO:0009723 [list] [network] response to ethylene	(170 genes)	IMP
GO:0050832 [list] [network] defense response to fungus	(282 genes)	IMP
GO:0048364 [list] [network] root development	(600 genes)	IMP
GO:0009791 [list] [network] post-embryonic development	(1579 genes)	IMP

GO CC

GO:0043680 [list] [network] filiform apparatus	(6 genes)	IDA
GO:0009506 [list] [network] plasmodesma	(874 genes)	HDA
GO:0005886 [list] [network] plasma membrane	(2598 genes)	HDA IDA
GO:0005576 [list] [network] extracellular region	(3158 genes)	ISM

GO MF

GO:0004672 [list] [network] protein kinase activity	(737 genes)	IDA
GO:0016301 [list] [network] kinase activity	(1055 genes)	ISS
GO:0005515 [list] [network] protein binding	(5363 genes)	IPI

Protein

NP_190723.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, golg_plas 4, golg 1

(predict for NP_190723.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_190723.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for FER	ath-r.7 for FER	ath-m.9 for FER	ath-e.2 for FER	ath-m.4.bio for FER	ath-m.4.hor for FER	ath-m.4.lig for FER	ath-m.4.str for FER	ath-m.4.tis for FER	bra-r.6 for 103860712	bra-r.6 for 103872330	bra-r.6 for 103841079	bna-r.1 for 106448230	bna-r.1 for 106437922	bna-r.1 for 106367748	ghi-r.1 for 107896845	ghi-r.1 for 107910653	ghi-r.1 for 107912679	cit-r.1 for 102620371	cit-r.1 for 102610401	cit-r.1 for 102613289	gma-u.5 for 100526843	gma-u.5 for 100499644	vvi-u.5 for 100261909	vvi-u.5 for 100253138	vvi-u.5 for 100246444	ppo-u.5 for 18107319	ppo-u.5 for 7484636	ppo-u.5 for 7472486	mtr-u.5 for 25498856	sly-u.5 for 101255255	sly-u.5 for 101259360	sot-r.1 for 102605674	sot-r.1 for 102588417	nta-r.1 for 107810142	nta-r.1 for 107806084	nta-r.1 for 107799134	osa-u.5 for 4332743	osa-u.5 for 4338403	osa-u.5 for 4325600	zma-u.5 for 100274007	zma-u.5 for 103639167	tae-r.2 for 123052957	tae-r.2 for 123092221	tae-r.2 for 123085782	hvu-r.1 for 123448715	hvu-r.1 for 123400168	hvu-r.1 for 123440783	sbi-r.1 for 8066853	sbi-r.1 for 8082347	bdi-r.1 for 100832452	bdi-r.1 for 100828225

Ortholog

Ortholog ID: 1546

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

FER

Function^*

Malectin/receptor-like protein kinase family protein

receptor-like protein kinase FERONIA

receptor-like kinase

FERONIA receptor-like kinase

receptor-like protein kinase FERONIA

putative receptor-like protein kinase At5g39000

receptor-like protein kinase FERONIA

Receptor-like protein kinase FERONIA

receptor-like protein kinase FERONIA

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	6
bra04142	Lysosome	5
bra05100	Bacterial invasion of epithelial cells	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	5
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	3
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00250	Alanine, aspartate and glutamate metabolism	4
bdi00410	beta-Alanine metabolism	4
bdi00430	Taurine and hypotaurine metabolism	4
bdi00650	Butanoate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	3

Expression

Expression pattern

Entrez Gene ID^*

824318

103860712

103872330

103841079

106448230

106437922

106367748

107896845

107914505

107926529

102613289

112498596

102609835

100526843

100499644

100261909

100241219

109123910

18107319

7472486

18107329

25498856

101255255

101259360

102605674

102588417

107810142

107806084

107799134

4332743

4338403

4325600

100274007

103639167

123052957

123129386

123112885

123448715

123400168

123440783

8066853

8082347

100832452

100828225

The preparation time of this page was 0.4 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	9	3	3	3	3	2	3	3	1	2	2	3	3	2	3	3	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to FER (ath-u.5 coexpression data)

Top 50 enrichment test to FER (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**