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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G53440   Homeodomain-like superfamily protein 
 ath-r.7   AT3G53440   Homeodomain-like superfamily protein 
 ath-m.9   AT3G53440   Homeodomain-like superfamily protein 
 ath-e.2   AT3G53440   Homeodomain-like superfamily protein 
 ath-m.4.bio   AT3G53440   Homeodomain-like superfamily protein 
 ath-m.4.hor   AT3G53440   Homeodomain-like superfamily protein 
 ath-m.4.lig   AT3G53440   Homeodomain-like superfamily protein 
 ath-m.4.str   AT3G53440   Homeodomain-like superfamily protein 
 ath-m.4.tis   AT3G53440   Homeodomain-like superfamily protein 
 bra-r.6   103841269   uncharacterized LOC103841269 
 bna-r.1   BNAA09G33740D   uncharacterized BNAA09G33740D 
 bna-r.1   BNAC08G24490D   uncharacterized BNAC08G24490D 
 ghi-r.1   107911615   uncharacterized LOC107911615 
 ghi-r.1   107899965   uncharacterized LOC107899965 
 ghi-r.1   107950495   biorientation of chromosomes in cell division protein 1-like 1 
 cit-r.1   102626932   uncharacterized LOC102626932 
 gma-u.5   100806410   uncharacterized LOC100806410 
 gma-u.5   100777884   uncharacterized LOC100777884 
 vvi-u.5   104882347   uncharacterized LOC104882347 
 ppo-u.5   18100810   uncharacterized LOC18100810 
 mtr-u.5   11406272   uncharacterized LOC11406272 
 sly-u.5   101243635   uncharacterized LOC101243635 
 sot-r.1   102601585   uncharacterized LOC102601585 
 nta-r.1   107818203   uncharacterized LOC107818203 
 nta-r.1   107808925   uncharacterized LOC107808925 
 nta-r.1   142176743   uncharacterized LOC142176743 
 osa-u.5   9272369   uncharacterized LOC9272369 
 zma-u.5   100502236   uncharacterized LOC100502236 
 zma-u.5   100217234   uncharacterized LOC100217234 
 tae-r.2   123159785   uncharacterized LOC123159785 
 tae-r.2   123147789   uncharacterized LOC123147789 
 tae-r.2   123166306   uncharacterized LOC123166306 
 hvu-r.1   123411487   uncharacterized LOC123411487 
 sbi-r.1   8065308   uncharacterized LOC8065308 
 sbi-r.1   8058515   uncharacterized LOC8058515 
 bdi-r.1   100839407   uncharacterized LOC100839407 
 bdi-r.1   100829258   uncharacterized LOC100829258 
 cre-r.1   CHLRE_14g624600v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G53440 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G53440 (ath-u.5 coexpression data)

CoexMap"824512"


athAT3G53440 | Entrez gene ID : 824512      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 1 2 1 1 1 1 1 3 1 2 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_190912.1 [sequence] [blastp]
NP_850691.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  chlo_mito 3  (predict for NP_190912.1)
chlo 4,  nucl 3,  chlo_mito 3  (predict for NP_850691.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_190912.1)
mito 5  (predict for NP_850691.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G53440
ath-r.7
for
AT3G53440
ath-m.9
for
AT3G53440
ath-e.2
for
AT3G53440
ath-m.4.bio
for
AT3G53440
ath-m.4.hor
for
AT3G53440
ath-m.4.lig
for
AT3G53440
ath-m.4.str
for
AT3G53440
ath-m.4.tis
for
AT3G53440
bra-r.6
for
103841269
bna-r.1
for
BNAA09G33740D
bna-r.1
for
BNAC08G24490D
ghi-r.1
for
107911615
ghi-r.1
for
107899965
ghi-r.1
for
107950495
cit-r.1
for
102626932
gma-u.5
for
100806410
gma-u.5
for
100777884
vvi-u.5
for
104882347
ppo-u.5
for
18100810
mtr-u.5
for
11406272
sly-u.5
for
101243635
sot-r.1
for
102601585
nta-r.1
for
107818203
nta-r.1
for
107808925
nta-r.1
for
142176743
osa-u.5
for
9272369
zma-u.5
for
100502236
zma-u.5
for
100217234
tae-r.2
for
123159785
tae-r.2
for
123147789
tae-r.2
for
123166306
hvu-r.1
for
123411487
sbi-r.1
for
8065308
sbi-r.1
for
8058515
bdi-r.1
for
100839407
bdi-r.1
for
100829258
cre-r.1
for
CHLRE_14g624600v5


Ortholog ID: 6583
Species ath bra bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta nta osa zma zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol AT3G53440 LOC103841269 BNAA09G33740D BNAC08G24490D LOC107911615 LOC107899965 LOC107950495 LOC102626932 LOC100806410 LOC100777884 LOC104882347 LOC18100810 LOC11406272 LOC101243635 LOC102601585 LOC107818203 LOC107808925 LOC142176743 LOC9272369 LOC100502236 LOC100217234 LOC123159785 LOC123147789 LOC123166306 LOC123411487 LOC8065308 LOC8058515 LOC100839407 LOC100829258 CHLRE_14g624600v5
Function* Homeodomain-like superfamily protein uncharacterized LOC103841269 uncharacterized BNAA09G33740D uncharacterized BNAC08G24490D uncharacterized LOC107911615 uncharacterized LOC107899965 biorientation of chromosomes in cell division protein 1-like 1 uncharacterized LOC102626932 uncharacterized LOC100806410 uncharacterized LOC100777884 uncharacterized LOC104882347 uncharacterized LOC18100810 uncharacterized LOC11406272 uncharacterized LOC101243635 uncharacterized LOC102601585 uncharacterized LOC107818203 uncharacterized LOC107808925 uncharacterized LOC142176743 uncharacterized LOC9272369 uncharacterized LOC100502236 uncharacterized LOC100217234 uncharacterized LOC123159785 uncharacterized LOC123147789 uncharacterized LOC123166306 uncharacterized LOC123411487 uncharacterized LOC8065308 uncharacterized LOC8058515 uncharacterized LOC100839407 uncharacterized LOC100829258 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
bna04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03083 Polycomb repressive complex 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 6
gma03410 Base excision repair 5
gma03420 Nucleotide excision repair 5
gma03430 Mismatch repair 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 3
zma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 3
cre04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824512 103841269 106366109 106387398 107911615 107899965 107950495 102626932 100806410 100777884 104882347 18100810 11406272 101243635 102601585 107818203 107808925 142176743 9272369 100502236 100217234 123159785 123147789 123166306 123411487 8065308 8058515 100839407 100829258 5718306
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