Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AP3   K-box region and MADS-box transcription factor family protein 
 ath-r.7   AP3   K-box region and MADS-box transcription factor family protein 
 ath-m.9   AP3   K-box region and MADS-box transcription factor family protein 
 ath-e.2   AP3   K-box region and MADS-box transcription factor family protein 
 ath-m.4.bio   AP3   K-box region and MADS-box transcription factor family protein 
 ath-m.4.hor   AP3   K-box region and MADS-box transcription factor family protein 
 ath-m.4.lig   AP3   K-box region and MADS-box transcription factor family protein 
 ath-m.4.str   AP3   K-box region and MADS-box transcription factor family protein 
 ath-m.4.tis   AP3   K-box region and MADS-box transcription factor family protein 
 bra-r.6   103841349   floral homeotic protein APETALA 3 
 bna-r.1   106414228   floral homeotic protein APETALA 3-like 
 bna-r.1   106414257   floral homeotic protein APETALA 3 
 bna-r.1   106431373   floral homeotic protein APETALA 3-like 
 ghi-r.1   107957589   floral homeotic protein PMADS 1-like 
 ghi-r.1   107945819   floral homeotic protein PMADS 1-like 
 ghi-r.1   107936526   agamous-like MADS-box protein TM6 
 cit-r.1   102609278   agamous-like MADS-box protein AP3 
 cit-r.1   102616570   agamous-like MADS-box protein AP3 
 cit-r.1   102627791   agamous-like MADS-box protein TM6 
 gma-u.5   100791963   agamous-like MADS-box protein TM6 
 gma-u.5   100809514   agamous-like MADS-box protein AP3 
 gma-u.5   NMH7   MADS-box protein NMH7 
 vvi-u.5   AP3   flowering-related B-class MADS-box protein APETALA3 
 vvi-u.5   TM6   flowering-related B-class MADS-box protein 
 ppo-u.5   18101228   agamous-like MADS-box protein TM6 
 mtr-u.5   11433683   agamous-like MADS-box protein AP3 
 mtr-u.5   11426468   agamous-like MADS-box protein TM6 
 sly-u.5   TDR6   TDR6 transcription factor 
 sly-u.5   DEF   floral homeotic protein DEFICIENS 
 sot-r.1   102601659   floral homeotic protein DEFICIENS-like 
 nta-r.1   107782243   agamous-like MADS-box protein TM6 
 nta-r.1   107766579   floral homeotic protein PMADS 1 
 nta-r.1   107802634   floral homeotic protein PMADS 1 
 osa-u.5   4342047   MADS-box transcription factor 16-like 
 zma-u.5   541799   silky 1 
 tae-r.2   123141252   MADS-box transcription factor 16-like 

close


Top 50 coexpressed genes to AP3 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AP3 (ath-u.5 coexpression data)

CoexMap"824601"


athAP3 | Entrez gene ID : 824601      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu bdi cre sbi
Paralog 9 1 3 3 3 3 2 1 2 2 1 3 1 1 1 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010093 [list] [network] specification of floral organ identity  (13 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_191002.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_191002.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for NP_191002.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AP3
ath-r.7
for
AP3
ath-m.9
for
AP3
ath-e.2
for
AP3
ath-m.4.bio
for
AP3
ath-m.4.hor
for
AP3
ath-m.4.lig
for
AP3
ath-m.4.str
for
AP3
ath-m.4.tis
for
AP3
bra-r.6
for
103841349
bna-r.1
for
106414228
bna-r.1
for
106414257
bna-r.1
for
106431373
ghi-r.1
for
107957589
ghi-r.1
for
107945819
ghi-r.1
for
107936526
cit-r.1
for
102609278
cit-r.1
for
102616570
cit-r.1
for
102627791
gma-u.5
for
100791963
gma-u.5
for
100809514
gma-u.5
for
NMH7
vvi-u.5
for
AP3
vvi-u.5
for
TM6
ppo-u.5
for
18101228
mtr-u.5
for
11433683
mtr-u.5
for
11426468
sly-u.5
for
TDR6
sly-u.5
for
DEF
sot-r.1
for
102601659
nta-r.1
for
107782243
nta-r.1
for
107766579
nta-r.1
for
107802634
osa-u.5
for
4342047
zma-u.5
for
541799
tae-r.2
for
123141252


Ortholog ID: 3591
Species ath bra bna bna bna ghi ghi ghi cit cit cit gma gma gma vvi vvi ppo mtr mtr sly sly sot nta nta nta osa zma tae tae
Symbol AP3 LOC103841349 LOC106414228 LOC106431373 LOC106449291 LOC107936526 LOC107927061 LOC107909434 LOC102609278 LOC102616570 LOC102627791 LOC100809514 NMH7 LOC100784496 AP3 TM6 LOC18101228 LOC11433683 LOC11426468 TDR6 DEF LOC102601659 LOC107766579 LOC107802634 LOC142179077 LOC4342047 LOC541799 LOC123157564 LOC542801
Function* K-box region and MADS-box transcription factor family protein floral homeotic protein APETALA 3 floral homeotic protein APETALA 3-like floral homeotic protein APETALA 3-like floral homeotic protein APETALA 3-like agamous-like MADS-box protein TM6 floral homeotic protein PMADS 1-like floral homeotic protein PMADS 1-like agamous-like MADS-box protein AP3 agamous-like MADS-box protein AP3 agamous-like MADS-box protein TM6 agamous-like MADS-box protein AP3 MADS-box protein NMH7 floral homeotic protein DEFICIENS-like flowering-related B-class MADS-box protein APETALA3 flowering-related B-class MADS-box protein agamous-like MADS-box protein TM6 agamous-like MADS-box protein AP3 agamous-like MADS-box protein TM6 TDR6 transcription factor floral homeotic protein DEFICIENS floral homeotic protein DEFICIENS-like floral homeotic protein PMADS 1 floral homeotic protein PMADS 1 floral homeotic protein PMADS 1 MADS-box transcription factor 16-like silky 1 MADS-box transcription factor 16 MADS-box transcription factor 16
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 2
tae00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824601 103841349 106414228 106431373 106449291 107936526 107927061 107909434 102609278 102616570 102627791 100809514 547720 100784496 100233029 100233014 18101228 11433683 11426468 544255 778307 102601659 107766579 107802634 142179077 4342047 541799 123157564 542801
The preparation time of this page was 0.1 [sec].