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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   NRPA1   nuclear RNA polymerase A1 
 ath-r.7   NRPA1   nuclear RNA polymerase A1 
 ath-m.9   NRPA1   nuclear RNA polymerase A1 
 ath-e.2   NRPA1   nuclear RNA polymerase A1 
 ath-m.4.bio   NRPA1   nuclear RNA polymerase A1 
 ath-m.4.hor   NRPA1   nuclear RNA polymerase A1 
 ath-m.4.lig   NRPA1   nuclear RNA polymerase A1 
 ath-m.4.str   NRPA1   nuclear RNA polymerase A1 
 ath-m.4.tis   NRPA1   nuclear RNA polymerase A1 
 gma-u.5   100779532   DNA-directed RNA polymerase I subunit 1 
 vvi-u.5   100250406   DNA-directed RNA polymerase I subunit 1 
 ppo-u.5   18099840   DNA-directed RNA polymerase I subunit 1 
 mtr-u.5   11444522   DNA-directed RNA polymerase I subunit 1 
 sly-u.5   101260591   DNA-directed RNA polymerase I subunit 1 
 osa-u.5   9270399   DNA-directed RNA polymerase I subunit 1 
 zma-u.5   100279825   DNA-directed RNA polymerase I subunit 1 
 zma-u.5   109942860   DNA-directed RNA polymerase I subunit 1 

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Top 50 coexpressed genes to NRPA1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to NRPA1 (ath-u.5 coexpression data)

CoexMap"824935"


athNRPA1 | Entrez gene ID : 824935      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 9 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03020 [list] [network] RNA polymerase (52 genes)
GO BP
GO CC
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA ISM  
GO MF
Protein NP_001325828.1 [sequence] [blastp]
NP_191325.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001325828.1)
cyto 5,  nucl 3,  cyto_plas 3  (predict for NP_191325.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001325828.1)
scret 4  (predict for NP_191325.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
NRPA1

.
ath-r.7
for
NRPA1

.
ath-m.9
for
NRPA1

.
ath-e.2
for
NRPA1

.
ath-m.4.bio
for
NRPA1

.
ath-m.4.hor
for
NRPA1

.
ath-m.4.lig
for
NRPA1

.
ath-m.4.str
for
NRPA1

.
ath-m.4.tis
for
NRPA1

.
gma-u.5
for
100779532

.
vvi-u.5
for
100250406

.
ppo-u.5
for
18099840

.
mtr-u.5
for
11444522

.
sly-u.5
for
101260591

.
osa-u.5
for
9270399

.
zma-u.5
for
100279825

.
zma-u.5
for
109942860

.


Ortholog ID: 8989
Species ath gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol NRPA1 LOC100779532 LOC101260591 LOC9270399 LOC100279825 LOC109942860 LOC103830117 LOC103841672 LOC100250406 LOC18099840 LOC11444522 LOC123087765 LOC123114167 LOC123394932 LOC107950708 LOC107951811 LOC106356841 LOC106368196 CHLRE_12g529600v5 LOC8061093 LOC102592134 LOC102625708 LOC100821444 LOC107806552 LOC107816097
Function* nuclear RNA polymerase A1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1-like DNA-directed RNA polymerase I subunit 1 uncharacterized protein DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03018 RNA degradation 4
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 3
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 5
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 7
tae03018 RNA degradation 3
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 6
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03020 RNA polymerase 2
sot00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824935 100779532 101260591 9270399 100279825 109942860 103830117 103841672 100250406 18099840 11444522 123087765 123114167 123394932 107950708 107951811 106356841 106368196 5722421 8061093 102592134 102625708 100821444 107806552 107816097
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