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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   NTT   C2H2-type zinc finger family protein 
 ath-r.7   NTT   C2H2-type zinc finger family protein 
 ath-m.9   NTT   C2H2-type zinc finger family protein 
 ath-e.2   NTT   C2H2-type zinc finger family protein 
 ath-m.4.bio   NTT   C2H2-type zinc finger family protein 
 ath-m.4.hor   NTT   C2H2-type zinc finger family protein 
 ath-m.4.lig   NTT   C2H2-type zinc finger family protein 
 ath-m.4.str   NTT   C2H2-type zinc finger family protein 
 ath-m.4.tis   NTT   C2H2-type zinc finger family protein 
 ath-u.5   WIP4   WIP domain protein 4 
 ath-u.5   WIP3   WIP domain protein 3 
 gma-u.5   100788451   zinc finger protein WIP3 
 gma-u.5   100789416   zinc finger protein WIP5-like 
 vvi-u.5   100245035   zinc finger protein WIP2 
 mtr-u.5   112421394   zinc finger protein WIP2 
 sly-u.5   101257840   zinc finger protein WIP2 
 sly-u.5   101254266   zinc finger protein WIP2 
 osa-u.5   4338934   protein TRANSPARENT TESTA 1 
 osa-u.5   4341518   zinc finger protein WIP2 
 osa-u.5   4346617   zinc finger protein WIP2 
 zma-u.5   100284341   zinc finger, C2H2 type family protein 
 zma-u.5   103630405   protein TRANSPARENT TESTA 1 
 zma-u.5   100277627   uncharacterized LOC100277627 

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Top 50 coexpressed genes to NTT (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to NTT (ath-u.5 coexpression data)

CoexMap"824936"


athNTT | Entrez gene ID : 824936      
Species ath gma vvi mtr sly osa zma sot hvu tae cit sbi ppo ghi cre bna nta bdi bra
Paralog 11 2 1 1 2 3 3 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1990058 [list] [network] fruit replum development  (2 genes)  IMP  
GO:0010500 [list] [network] transmitting tissue development  (4 genes)  IMP  
GO:0001709 [list] [network] cell fate determination  (7 genes)  IMP  
GO:0080022 [list] [network] primary root development  (40 genes)  IGI  
GO:0009860 [list] [network] pollen tube growth  (151 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO:0010468 [list] [network] regulation of gene expression  (2062 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_191326.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_191326.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_191326.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
NTT

.
ath-r.7
for
NTT

.
ath-m.9
for
NTT

.
ath-e.2
for
NTT

.
ath-m.4.bio
for
NTT

.
ath-m.4.hor
for
NTT

.
ath-m.4.lig
for
NTT

.
ath-m.4.str
for
NTT

.
ath-m.4.tis
for
NTT

.
ath-u.5
for
WIP4

.
ath-u.5
for
WIP3

.
gma-u.5
for
100788451

.
gma-u.5
for
100789416

.
vvi-u.5
for
100245035

.
mtr-u.5
for
112421394

.
sly-u.5
for
101257840

.
sly-u.5
for
101254266

.
osa-u.5
for
4338934

.
osa-u.5
for
4341518

.
osa-u.5
for
4346617

.
zma-u.5
for
100284341

.
zma-u.5
for
103630405

.
zma-u.5
for
100277627

.


Ortholog ID: 239
Species gma sly sly osa zma bra vvi vvi ppo mtr tae hvu ghi ghi sbi sbi cit bdi bdi nta nta
Symbol LOC100813583 LOC101257840 LOC101254266 LOC4341518 LOC103638807 LOC103843405 LOC100244743 LOC100245035 LOC7466819 LOC112421394 LOC123162376 LOC123415354 LOC107889166 LOC107901465 LOC8072505 LOC8055865 LOC102621206 LOC100845582 LOC100825670 LOC107804971 LOC107816764
Function* zinc finger protein WIP2 zinc finger protein WIP2 zinc finger protein WIP2 zinc finger protein WIP2 zinc finger protein WIP2 zinc finger protein WIP3 zinc finger protein WIP2 zinc finger protein WIP2 zinc finger protein WIP3 zinc finger protein WIP2 zinc finger protein WIP2 protein TRANSPARENT TESTA 1-like zinc finger protein WIP3 protein TRANSPARENT TESTA 1 protein TRANSPARENT TESTA 1 zinc finger protein WIP2 zinc finger protein WIP2-like protein TRANSPARENT TESTA 1 zinc finger protein WIP2 zinc finger protein WIP3 zinc finger protein WIP2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100813583 101257840 101254266 4341518 103638807 103843405 100244743 100245035 7466819 112421394 123162376 123415354 107889166 107901465 8072505 8055865 102621206 100845582 100825670 107804971 107816764
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