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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   CDS5   cytidinediphosphate diacylglycerol synthase 5 
 ath-r.7   CDS5   cytidinediphosphate diacylglycerol synthase 5 
 ath-m.9   CDS5   cytidinediphosphate diacylglycerol synthase 5 
 ath-e.2   CDS5   cytidinediphosphate diacylglycerol synthase 5 
 ath-m.4.bio   CDS5   cytidinediphosphate diacylglycerol synthase 5 
 ath-m.4.hor   CDS5   cytidinediphosphate diacylglycerol synthase 5 
 ath-m.4.lig   CDS5   cytidinediphosphate diacylglycerol synthase 5 
 ath-m.4.str   CDS5   cytidinediphosphate diacylglycerol synthase 5 
 ath-m.4.tis   CDS5   cytidinediphosphate diacylglycerol synthase 5 
 ath-u.5   CDS4   cytidinediphosphate diacylglycerol synthase 4 
 gma-u.5   100814316   phosphatidate cytidylyltransferase 4, chloroplastic 
 gma-u.5   100809100   phosphatidate cytidylyltransferase 4, chloroplastic 
 vvi-u.5   100248919   phosphatidate cytidylyltransferase 4, chloroplastic 
 ppo-u.5   18105184   phosphatidate cytidylyltransferase 4, chloroplastic 
 mtr-u.5   25491030   phosphatidate cytidylyltransferase 4, chloroplastic 
 sly-u.5   101245291   phosphatidate cytidylyltransferase 4, chloroplastic 
 osa-u.5   4328160   phosphatidate cytidylyltransferase 4, chloroplastic 
 zma-u.5   100284256   phosphatidate cytidylyltransferase 
 zma-u.5   100283421   phosphatidate cytidylyltransferase 

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Top 50 coexpressed genes to CDS5 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CDS5 (ath-u.5 coexpression data)

CoexMap"825233"


athCDS5 | Entrez gene ID : 825233      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 10 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00564 [list] [network] Glycerophospholipid metabolism (99 genes)
ath04070 [list] [network] Phosphatidylinositol signaling system (77 genes)
GO BP
GO:0006655 [list] [network] phosphatidylglycerol biosynthetic process  (6 genes)  IMP  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  IMP  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA IDA  
GO MF
GO:0004605 [list] [network] phosphatidate cytidylyltransferase activity  (6 genes)  IMP  
Protein NP_001327716.1 [sequence] [blastp]
NP_191621.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  plas 1,  E.R. 1,  golg 1,  nucl_plas 1,  cysk_plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001327716.1)
chlo 4,  plas 4,  E.R. 1  (predict for NP_191621.1)
Subcellular
localization
TargetP
chlo 4  (predict for NP_001327716.1)
chlo 4  (predict for NP_191621.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
CDS5

.
ath-r.7
for
CDS5

.
ath-m.9
for
CDS5

.
ath-e.2
for
CDS5

.
ath-m.4.bio
for
CDS5

.
ath-m.4.hor
for
CDS5

.
ath-m.4.lig
for
CDS5

.
ath-m.4.str
for
CDS5

.
ath-m.4.tis
for
CDS5

.
ath-u.5
for
CDS4

.
gma-u.5
for
100814316

.
gma-u.5
for
100809100

.
vvi-u.5
for
100248919

.
ppo-u.5
for
18105184

.
mtr-u.5
for
25491030

.
sly-u.5
for
101245291

.
osa-u.5
for
4328160

.
zma-u.5
for
100284256

.
zma-u.5
for
100283421

.


Ortholog ID: 7553
Species ath ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol CDS5 CDS4 LOC100809100 LOC100814316 LOC101245291 LOC4328160 LOC100283421 LOC100284256 LOC103841908 LOC103858158 LOC100248919 LOC18105184 LOC25491030 LOC123136003 LOC123132016 LOC123401434 LOC107952767 LOC107954566 LOC106438237 LOC106415775 CHLRE_12g489050v5 LOC8055075 LOC102578208 LOC102610652 LOC100838812 LOC107806310 LOC107802310
Function* cytidinediphosphate diacylglycerol synthase 5 cytidinediphosphate diacylglycerol synthase 4 phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase phosphatidate cytidylyltransferase phosphatidate cytidylyltransferase 5, chloroplastic phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase 5, chloroplastic uncharacterized protein phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase 4, chloroplastic hypothetical protein phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase 4, chloroplastic phosphatidate cytidylyltransferase 4, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
gma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 3
sly01240 Biosynthesis of cofactors 3
sly00970 Aminoacyl-tRNA biosynthesis 2
sly00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 2
zma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
zma00564 Glycerophospholipid metabolism 2
zma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae00780 Biotin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae00780 Biotin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 3
bna03450 Non-homologous end-joining 3
bna00564 Glycerophospholipid metabolism 2
bna04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna00564 Glycerophospholipid metabolism 2
bna04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 4
sbi00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 7
sot00520 Amino sugar and nucleotide sugar metabolism 3
sot01250 Biosynthesis of nucleotide sugars 3
sot00010 Glycolysis / Gluconeogenesis 2
sot00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825233 819123 100809100 100814316 101245291 4328160 100283421 100284256 103841908 103858158 100248919 18105184 25491030 123136003 123132016 123401434 107952767 107954566 106438237 106415775 5716676 8055075 102578208 102610652 100838812 107806310 107802310
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