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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G03180   rRNA-processing protein 
 ath-r.7   AT4G03180   rRNA-processing protein 
 ath-m.9   AT4G03180   rRNA-processing protein 
 ath-e.2   AT4G03180   rRNA-processing protein 
 ath-m.4.bio   AT4G03180   rRNA-processing protein 
 ath-m.4.hor   AT4G03180   rRNA-processing protein 
 ath-m.4.lig   AT4G03180   rRNA-processing protein 
 ath-m.4.str   AT4G03180   rRNA-processing protein 
 ath-m.4.tis   AT4G03180   rRNA-processing protein 
 bra-r.6   103868176   rRNA-processing protein FYV7 
 bna-r.1   106430045   rRNA-processing protein FYV7 
 ghi-r.1   107922839   stress response protein nst1 
 cit-r.1   102631164   rRNA-processing protein FYV7 
 gma-u.5   100816761   stress response protein NST1 
 gma-u.5   100784376   rRNA-processing protein FYV7 
 vvi-u.5   100254601   rRNA-processing protein FYV7 
 ppo-u.5   7491324   stress response protein NST1 
 sly-u.5   101248116   rRNA-processing protein fyv7 
 sot-r.1   102579327   rRNA-processing protein FYV7 
 nta-r.1   107770202   uncharacterized LOC107770202 
 nta-r.1   107806786   uncharacterized LOC107806786 
 osa-u.5   4352422   rRNA-processing protein FYV7 
 zma-u.5   103157009   uncharacterized LOC103157009 
 tae-r.2   123119823   rRNA-processing protein FYV7 
 tae-r.2   123110821   rRNA-processing protein FYV7 
 tae-r.2   123102635   rRNA-processing protein FYV7 
 hvu-r.1   123396863   rRNA-processing protein FYV7 
 sbi-r.1   8067242   rRNA-processing protein FYV7 
 bdi-r.1   100834127   stress response protein nst1 

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Top 50 coexpressed genes to AT4G03180 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G03180 (ath-u.5 coexpression data)

CoexMap"828047"


athAT4G03180 | Entrez gene ID : 828047      
Species ath bra bna ghi cit gma vvi ppo sly sot nta osa zma tae hvu sbi bdi cre mtr
Paralog 9 1 1 1 1 2 1 1 1 1 2 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001327982.1 [sequence] [blastp]
NP_192227.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  mito 1  (predict for NP_001327982.1)
nucl 9,  cyto 1,  extr 1  (predict for NP_192227.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001327982.1)
other 8  (predict for NP_192227.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G03180
ath-r.7
for
AT4G03180
ath-m.9
for
AT4G03180
ath-e.2
for
AT4G03180
ath-m.4.bio
for
AT4G03180
ath-m.4.hor
for
AT4G03180
ath-m.4.lig
for
AT4G03180
ath-m.4.str
for
AT4G03180
ath-m.4.tis
for
AT4G03180
bra-r.6
for
103868176
bna-r.1
for
106430045
ghi-r.1
for
107922839
cit-r.1
for
102631164
gma-u.5
for
100816761
gma-u.5
for
100784376
vvi-u.5
for
100254601
ppo-u.5
for
7491324
sly-u.5
for
101248116
sot-r.1
for
102579327
nta-r.1
for
107770202
nta-r.1
for
107806786
osa-u.5
for
4352422
zma-u.5
for
103157009
tae-r.2
for
123119823
tae-r.2
for
123110821
tae-r.2
for
123102635
hvu-r.1
for
123396863
sbi-r.1
for
8067242
bdi-r.1
for
100834127


Ortholog ID: 11367
Species ath bra bna ghi cit gma gma vvi ppo sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT4G03180 LOC103868176 LOC106430045 LOC107922839 LOC102631164 LOC100816761 LOC100784376 LOC100254601 LOC7491324 LOC101248116 LOC102579327 LOC107770202 LOC107806786 LOC4352422 LOC103157009 LOC123119823 LOC123110821 LOC123102635 LOC123396863 LOC8067242 LOC100834127
Function* rRNA-processing protein rRNA-processing protein FYV7 rRNA-processing protein FYV7 stress response protein nst1 rRNA-processing protein FYV7 stress response protein NST1 rRNA-processing protein FYV7 rRNA-processing protein FYV7 stress response protein NST1 rRNA-processing protein fyv7 rRNA-processing protein FYV7 uncharacterized LOC107770202 uncharacterized LOC107806786 rRNA-processing protein FYV7 uncharacterized LOC103157009 rRNA-processing protein FYV7 rRNA-processing protein FYV7 rRNA-processing protein FYV7 rRNA-processing protein FYV7 rRNA-processing protein FYV7 stress response protein nst1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828047 103868176 106430045 107922839 102631164 100816761 100784376 100254601 7491324 101248116 102579327 107770202 107806786 4352422 103157009 123119823 123110821 123102635 123396863 8067242 100834127
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