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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   emb2726   elongation factor Ts family protein 
 ath-r.7   emb2726   elongation factor Ts family protein 
 ath-m.9   emb2726   elongation factor Ts family protein 
 ath-e.2   emb2726   elongation factor Ts family protein 
 ath-m.4.bio   emb2726   elongation factor Ts family protein 
 ath-m.4.hor   emb2726   elongation factor Ts family protein 
 ath-m.4.lig   emb2726   elongation factor Ts family protein 
 ath-m.4.str   emb2726   elongation factor Ts family protein 
 ath-m.4.tis   emb2726   elongation factor Ts family protein 
 gma-u.5   100804285   polyprotein of EF-Ts, chloroplastic 
 gma-u.5   100797166   polyprotein of EF-Ts, chloroplastic 
 vvi-u.5   100262932   polyprotein of EF-Ts, chloroplastic 
 ppo-u.5   7458776   polyprotein of EF-Ts, chloroplastic 
 mtr-u.5   11427581   polyprotein of EF-Ts, chloroplastic 
 sly-u.5   101245558   polyprotein of EF-Ts, chloroplastic 
 osa-u.5   4352441   uncharacterized LOC4352441 
 zma-u.5   100192861   uncharacterized LOC100192861 

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Top 50 coexpressed genes to emb2726 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to emb2726 (ath-u.5 coexpression data)

CoexMap"829027"


athemb2726 | Entrez gene ID : 829027      
Species ath gma vvi ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 9 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  NAS  
GO CC
GO:0043253 [list] [network] chloroplast ribosome  (2 genes)  ISS  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA ISM  
GO MF
GO:0061770 [list] [network] translation elongation factor binding  (1 genes)  ISS  
GO:0003729 [list] [network] mRNA binding  (1514 genes)  HDA IDA  
Protein NP_001031743.1 [sequence] [blastp]
NP_567820.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_001031743.1)
chlo 10  (predict for NP_567820.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001031743.1)
chlo 9  (predict for NP_567820.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
emb2726

.
ath-r.7
for
emb2726

.
ath-m.9
for
emb2726

.
ath-e.2
for
emb2726

.
ath-m.4.bio
for
emb2726

.
ath-m.4.hor
for
emb2726

.
ath-m.4.lig
for
emb2726

.
ath-m.4.str
for
emb2726

.
ath-m.4.tis
for
emb2726

.
gma-u.5
for
100804285

.
gma-u.5
for
100797166

.
vvi-u.5
for
100262932

.
ppo-u.5
for
7458776

.
mtr-u.5
for
11427581

.
sly-u.5
for
101245558

.
osa-u.5
for
4352441

.
zma-u.5
for
100192861

.


Ortholog ID: 9051
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit cit bdi nta nta
Symbol emb2726 LOC100804285 LOC100797166 LOC101245558 LOC4352441 LOC100192861 LOC103853867 LOC100262932 LOC7458776 LOC11427581 LOC123110803 LOC123102619 LOC123397951 LOC107901256 LOC107932021 LOC106375505 LOC106398700 CHLRE_12g519180v5 LOC8072259 LOC102602783 LOC102610230 LOC102629174 LOC100836461 LOC107815564 LOC107813570
Function* elongation factor Ts family protein polyprotein of EF-Ts, chloroplastic polyprotein of EF-Ts, chloroplastic polyprotein of EF-Ts, chloroplastic uncharacterized LOC4352441 uncharacterized LOC100192861 altered inheritance of mitochondria protein 21 polyprotein of EF-Ts, chloroplastic polyprotein of EF-Ts, chloroplastic polyprotein of EF-Ts, chloroplastic polyprotein of EF-Ts, chloroplastic polyprotein of EF-Ts, chloroplastic polyprotein of EF-Ts, chloroplastic polyprotein of EF-Ts, chloroplastic polyprotein of EF-Ts, chloroplastic polyprotein of EF-Ts, chloroplastic polyprotein of EF-Ts, chloroplastic uncharacterized protein uncharacterized LOC8072259 uncharacterized LOC102602783 polyprotein of EF-Ts, chloroplastic polyprotein of EF-Ts, chloroplastic-like uncharacterized LOC100836461 polyprotein of EF-Ts, chloroplastic polyprotein of EF-Ts, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
tae00860 Porphyrin metabolism 3
tae00061 Fatty acid biosynthesis 3
tae00780 Biotin metabolism 3
tae01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 4
hvu01240 Biosynthesis of cofactors 2
hvu03018 RNA degradation 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 7
cre00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829027 100804285 100797166 101245558 4352441 100192861 103853867 100262932 7458776 11427581 123110803 123102619 123397951 107901256 107932021 106375505 106398700 5722614 8072259 102602783 102610230 102629174 100836461 107815564 107813570
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