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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ADC2   arginine decarboxylase 2 
 ath-r.7   ADC2   arginine decarboxylase 2 
 ath-m.9   ADC2   arginine decarboxylase 2 
 ath-e.2   ADC2   arginine decarboxylase 2 
 ath-m.4.bio   ADC2   arginine decarboxylase 2 
 ath-m.4.hor   ADC2   arginine decarboxylase 2 
 ath-m.4.lig   ADC2   arginine decarboxylase 2 
 ath-m.4.str   ADC2   arginine decarboxylase 2 
 ath-m.4.tis   ADC2   arginine decarboxylase 2 
 ath-u.5   ADC1   arginine decarboxylase 1 
 bra-r.6   103847569   arginine decarboxylase 2 
 bra-r.6   103834394   arginine decarboxylase 2 
 bra-r.6   103862369   arginine decarboxylase 2 
 bna-r.1   111207913   arginine decarboxylase 2 
 bna-r.1   106352939   arginine decarboxylase 2-like 
 bna-r.1   106428764   arginine decarboxylase 2 
 ghi-r.1   107919776   arginine decarboxylase-like 
 ghi-r.1   107927929   arginine decarboxylase 
 ghi-r.1   121214859   arginine decarboxylase 
 cit-r.1   102608169   arginine decarboxylase 
 gma-u.5   100793552   arginine decarboxylase 
 gma-u.5   ADC   arginine decarboxylase 
 vvi-u.5   100233080   arginine decarboxylase 
 ppo-u.5   7453603   arginine decarboxylase 
 mtr-u.5   11438086   arginine decarboxylase 
 sly-u.5   ADC   arginine decarboxylase 
 sly-u.5   adc1   arginine decarboxylase 
 sot-r.1   102600980   arginine decarboxylase 
 sot-r.1   102596487   arginine decarboxylase 
 nta-r.1   ADC1A   arginine decarboxylase-like 
 nta-r.1   107767963   arginine decarboxylase 
 nta-r.1   107759371   arginine decarboxylase 1B, chloroplastic 
 osa-u.5   4340008   arginine decarboxylase 1-like 
 zma-u.5   103638134   arginine decarboxylase 1 
 tae-r.2   123088184   arginine decarboxylase 1 
 tae-r.2   123124854   arginine decarboxylase 1-like 
 tae-r.2   101290633   arginine decarboxylase 1 
 hvu-r.1   123413577   arginine decarboxylase 1 
 sbi-r.1   8068388   arginine decarboxylase 1 
 bdi-r.1   100831880   arginine decarboxylase 1 

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Top 50 coexpressed genes to ADC2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ADC2 (ath-u.5 coexpression data)

CoexMap"829623"


athADC2 | Entrez gene ID : 829623      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 1 2 1 1 1 2 2 3 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00330 [list] [network] Arginine and proline metabolism (54 genes)
GO BP
GO:0009446 [list] [network] putrescine biosynthetic process  (5 genes)  IMP  
GO:0006596 [list] [network] polyamine biosynthetic process  (12 genes)  IMP  
GO:0009753 [list] [network] response to jasmonic acid  (202 genes)  IEP  
GO:0009611 [list] [network] response to wounding  (271 genes)  IEP  
GO:0006979 [list] [network] response to oxidative stress  (384 genes)  IEP  
GO:0009409 [list] [network] response to cold  (436 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (473 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IEP  
GO:0006970 [list] [network] response to osmotic stress  (578 genes)  IMP  
GO:0048316 [list] [network] seed development  (775 genes)  IGI  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0008792 [list] [network] arginine decarboxylase activity  (2 genes)  IMP  
GO:0042803 [list] [network] protein homodimerization activity  (237 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_195197.1 [sequence] [blastp]
NP_974684.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 3  (predict for NP_195197.1)
cyto 6,  chlo 3  (predict for NP_974684.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for NP_195197.1)
other 6,  chlo 3  (predict for NP_974684.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
ADC2
ath-r.7
for
ADC2
ath-m.9
for
ADC2
ath-e.2
for
ADC2
ath-m.4.bio
for
ADC2
ath-m.4.hor
for
ADC2
ath-m.4.lig
for
ADC2
ath-m.4.str
for
ADC2
ath-m.4.tis
for
ADC2
ath-u.5
for
ADC1
bra-r.6
for
103847569
bra-r.6
for
103834394
bra-r.6
for
103862369
bna-r.1
for
111207913
bna-r.1
for
106352939
bna-r.1
for
106428764
ghi-r.1
for
107919776
ghi-r.1
for
107927929
ghi-r.1
for
121214859
cit-r.1
for
102608169
gma-u.5
for
100793552
gma-u.5
for
ADC
vvi-u.5
for
100233080
ppo-u.5
for
7453603
mtr-u.5
for
11438086
sly-u.5
for
ADC
sly-u.5
for
adc1
sot-r.1
for
102600980
sot-r.1
for
102596487
nta-r.1
for
ADC1A
nta-r.1
for
107767963
nta-r.1
for
107759371
osa-u.5
for
4340008
zma-u.5
for
103638134
tae-r.2
for
123088184
tae-r.2
for
123124854
tae-r.2
for
101290633
hvu-r.1
for
123413577
sbi-r.1
for
8068388
bdi-r.1
for
100831880


Ortholog ID: 4514
Species ath ath bra bra bra bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol ADC2 ADC1 LOC103847569 LOC103834394 LOC103862369 LOC106352939 LOC106428764 LOC107927929 LOC107949089 LOC107893794 LOC102608169 LOC100793552 ADC LOC100233080 LOC7453603 LOC11438086 ADC adc1 LOC102600980 LOC102596487 LOC107767963 LOC107759371 LOC107796783 LOC4340008 LOC103638134 LOC123088184 LOC123120950 LOC100682517 LOC123413577 LOC8068388 LOC100831880
Function* arginine decarboxylase 2 arginine decarboxylase 1 arginine decarboxylase 2 arginine decarboxylase 2 arginine decarboxylase 2 arginine decarboxylase 2-like arginine decarboxylase 2 arginine decarboxylase arginine decarboxylase arginine decarboxylase arginine decarboxylase arginine decarboxylase arginine decarboxylase arginine decarboxylase arginine decarboxylase arginine decarboxylase arginine decarboxylase arginine decarboxylase arginine decarboxylase arginine decarboxylase arginine decarboxylase arginine decarboxylase 1B, chloroplastic arginine decarboxylase-like arginine decarboxylase 1-like arginine decarboxylase 1 arginine decarboxylase 1 arginine decarboxylase 1-like arginine decarboxylase 1 arginine decarboxylase 1 arginine decarboxylase 1 arginine decarboxylase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 3
ath04146 Peroxisome 3
ath00330 Arginine and proline metabolism 3
ath00052 Galactose metabolism 2
ath00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 7
bna00190 Oxidative phosphorylation 2
bna00910 Nitrogen metabolism 2
bna01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 7
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 4
gma00330 Arginine and proline metabolism 4
gma00020 Citrate cycle (TCA cycle) 2
gma00566 Sulfoquinovose metabolism 2
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 4
gma00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00220 Arginine biosynthesis 2
vvi00250 Alanine, aspartate and glutamate metabolism 2
vvi00910 Nitrogen metabolism 2
vvi01200 Carbon metabolism 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00330 Arginine and proline metabolism 3
ppo00052 Galactose metabolism 2
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 4
mtr04626 Plant-pathogen interaction 2
mtr00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00330 Arginine and proline metabolism 5
sly00940 Phenylpropanoid biosynthesis 4
sly00270 Cysteine and methionine metabolism 3
sly01230 Biosynthesis of amino acids 3
sly00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00330 Arginine and proline metabolism 4
sly04626 Plant-pathogen interaction 2
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 4
sot00330 Arginine and proline metabolism 3
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
sot00630 Glyoxylate and dicarboxylate metabolism 2
sot00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 4
sot00330 Arginine and proline metabolism 4
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
sot01230 Biosynthesis of amino acids 3
sot00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
nta01230 Biosynthesis of amino acids 6
nta00330 Arginine and proline metabolism 4
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 4
nta00410 beta-Alanine metabolism 2
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
nta01230 Biosynthesis of amino acids 6
nta00330 Arginine and proline metabolism 4
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 6
zma00020 Citrate cycle (TCA cycle) 5
zma00190 Oxidative phosphorylation 3
zma01210 2-Oxocarboxylic acid metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 3
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 3
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 3
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 7
hvu00360 Phenylalanine metabolism 5
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
hvu01230 Biosynthesis of amino acids 3
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
sbi00250 Alanine, aspartate and glutamate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829623 816149 103847569 103834394 103862369 106352939 106428764 107927929 107949089 107893794 102608169 100793552 548071 100233080 7453603 11438086 543960 543807 102600980 102596487 107767963 107759371 107796783 4340008 103638134 123088184 123120950 100682517 123413577 8068388 100831880
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