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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G37850   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-r.7   AT4G37850   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.9   AT4G37850   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-e.2   AT4G37850   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.bio   AT4G37850   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.hor   AT4G37850   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.lig   AT4G37850   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.str   AT4G37850   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.tis   AT4G37850   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100815491   transcription factor bHLH18 
 ppo-u.5   7470776   transcription factor bHLH18 
 mtr-u.5   11405743   transcription factor bHLH19 
 mtr-u.5   11407219   transcription factor bHLH25 
 mtr-u.5   11407280   transcription factor bHLH19 
 sly-u.5   101254428   transcription factor bHLH18-like 
 osa-u.5   4333965   transcription factor bHLH18 
 zma-u.5   100281729   symbiotic ammonium transporter 
 zma-u.5   100194106   uncharacterized LOC100194106 

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Top 50 coexpressed genes to AT4G37850 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G37850 (ath-u.5 coexpression data)

CoexMap"829941"


athAT4G37850 | Entrez gene ID : 829941      
Species ath gma ppo mtr sly osa zma sot hvu tae cit sbi ghi cre vvi bna nta bdi bra
Paralog 9 1 1 3 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  ISS TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (446 genes)  IEA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_001329767.1 [sequence] [blastp]
NP_195498.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001329767.1)
nucl 9  (predict for NP_195498.3)
Subcellular
localization
TargetP
other 8  (predict for NP_001329767.1)
other 8  (predict for NP_195498.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G37850

.
ath-r.7
for
AT4G37850

.
ath-m.9
for
AT4G37850

.
ath-e.2
for
AT4G37850

.
ath-m.4.bio
for
AT4G37850

.
ath-m.4.hor
for
AT4G37850

.
ath-m.4.lig
for
AT4G37850

.
ath-m.4.str
for
AT4G37850

.
ath-m.4.tis
for
AT4G37850

.
gma-u.5
for
100815491

.
ppo-u.5
for
7470776

.
mtr-u.5
for
11405743

.
mtr-u.5
for
11407219

.
mtr-u.5
for
11407280

.
sly-u.5
for
101254428

.
osa-u.5
for
4333965

.
zma-u.5
for
100281729

.
zma-u.5
for
100194106

.


Ortholog ID: 1373
Species ath gma sly osa zma zma vvi vvi ppo tae tae hvu ghi ghi sbi sot bdi
Symbol AT4G37850 LOC100791810 LOC101254428 LOC4333965 LOC100194106 LOC100281729 LOC100248064 LOC100242433 LOC7469672 LOC123095965 LOC123087026 LOC123447633 LOC107935247 LOC107935249 LOC110436805 LOC102585595 LOC100822179
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH25 transcription factor bHLH18-like transcription factor bHLH18 uncharacterized LOC100194106 symbiotic ammonium transporter transcription factor bHLH18 transcription factor bHLH18 transcription factor bHLH18 transcription factor bHLH18 transcription factor bHLH18 transcription factor bHLH18-like transcription factor bHLH18 transcription factor bHLH18 transcription factor bHLH18-like transcription factor bHLH18-like transcription factor bHLH18
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 7
zma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00999 Biosynthesis of various plant secondary metabolites 2
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00941 Flavonoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829941 100791810 101254428 4333965 100194106 100281729 100248064 100242433 7469672 123095965 123087026 123447633 107935247 107935249 110436805 102585595 100822179
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