ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT4G38490	uncharacterized protein
ath-r.7	AT4G38490	uncharacterized protein
ath-m.9	AT4G38490	uncharacterized protein
ath-e.2	AT4G38490	uncharacterized protein
ath-m.4.bio	AT4G38490	uncharacterized protein
ath-m.4.hor	AT4G38490	uncharacterized protein
ath-m.4.lig	AT4G38490	uncharacterized protein
ath-m.4.str	AT4G38490	uncharacterized protein
ath-m.4.tis	AT4G38490	uncharacterized protein
gma-u.5	100790097	uncharacterized LOC100790097
gma-u.5	100815558	uncharacterized LOC100815558
vvi-u.5	100245308	uncharacterized LOC100245308
ppo-u.5	7470419	uncharacterized LOC7470419
mtr-u.5	25495222	uncharacterized LOC25495222
sly-u.5	101245062	uncharacterized LOC101245062
osa-u.5	4347220	uncharacterized LOC4347220
zma-u.5	100277535	SecE/sec61-gamma subunit of protein translocation complex protein

Annotation

functional annotation

KEGG

GO BP

GO:0071806 [list] [network] protein transmembrane transport	(49 genes)	IMP
GO:0006605 [list] [network] protein targeting	(92 genes)	IEA
GO:0090351 [list] [network] seedling development	(137 genes)	IMP
GO:0006886 [list] [network] intracellular protein transport	(149 genes)	IEA

GO CC

GO:0009528 [list] [network] plastid inner membrane	(70 genes)	IDA
GO:0005739 [list] [network] mitochondrion	(4244 genes)	ISM

GO MF

GO:0005515 [list] [network] protein binding

(5363 genes)

IPI

Protein

NP_568043.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, vacu 3, mito 1, extr 1, cyto 1, E.R. 1, cyto_mito 1, mito_plas 1, cyto_E.R. 1

(predict for NP_568043.1)

Subcellular
localization
TargetP

mito 2

(predict for NP_568043.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT4G38490	ath-r.7 for AT4G38490	ath-m.9 for AT4G38490	ath-e.2 for AT4G38490	ath-m.4.bio for AT4G38490	ath-m.4.hor for AT4G38490	ath-m.4.lig for AT4G38490	ath-m.4.str for AT4G38490	ath-m.4.tis for AT4G38490	gma-u.5 for 100790097	gma-u.5 for 100815558	vvi-u.5 for 100245308	ppo-u.5 for 7470419	mtr-u.5 for 25495222	sly-u.5 for 101245062	osa-u.5 for 4347220	zma-u.5 for 100277535

Ortholog

Ortholog ID: 10909

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized protein

uncharacterized LOC103835182

uncharacterized LOC106361546

uncharacterized BNAC03G60010D

uncharacterized LOC107927823

uncharacterized LOC107908642

hypothetical protein

uncharacterized LOC100790097

uncharacterized LOC100815558

uncharacterized LOC100245308

uncharacterized LOC7470419

uncharacterized LOC25495222

uncharacterized LOC101245062

uncharacterized LOC102596744

uncharacterized LOC107811198

uncharacterized LOC107832807

uncharacterized LOC4347220

SecE/sec61-gamma subunit of protein translocation complex protein

uncharacterized LOC123121701

uncharacterized LOC123103930

uncharacterized LOC123398527

uncharacterized LOC8081030

uncharacterized LOC100838037

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4
bna03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01230	Biosynthesis of amino acids	3
sot03040	Spliceosome	3
sot00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03015	mRNA surveillance pathway	2
hvu00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

830005

103835182

106361546

106386157

107927823

107908642

102618553

100790097

100815558

100245308

7470419

25495222

101245062

102596744

107811198

107832807

4347220

100277535

123121701

123103930

123398527

8081030

100838037

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT4G38490 (ath-u.5 coexpression data)

Top 50 enrichment test to AT4G38490 (ath-u.5 coexpression data)


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	9	2	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT4G38490 (ath-u.5 coexpression data)

Top 50 enrichment test to AT4G38490 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**