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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G39420   spatacsin carboxy-terminus protein 
 ath-r.7   AT4G39420   spatacsin carboxy-terminus protein 
 ath-m.9   AT4G39420   spatacsin carboxy-terminus protein 
 ath-e.2   AT4G39420   spatacsin carboxy-terminus protein 
 ath-m.4.bio   AT4G39420   spatacsin carboxy-terminus protein 
 ath-m.4.hor   AT4G39420   spatacsin carboxy-terminus protein 
 ath-m.4.lig   AT4G39420   spatacsin carboxy-terminus protein 
 ath-m.4.str   AT4G39420   spatacsin carboxy-terminus protein 
 ath-m.4.tis   AT4G39420   spatacsin carboxy-terminus protein 
 bra-r.6   103847160   uncharacterized LOC103847160 
 bna-r.1   106439025   uncharacterized LOC106439025 
 bna-r.1   106352043   uncharacterized LOC106352043 
 ghi-r.1   107945506   uncharacterized LOC107945506 
 ghi-r.1   107925366   uncharacterized LOC107925366 
 cit-r.1   102626916   uncharacterized LOC102626916 
 gma-u.5   100811665   uncharacterized LOC100811665 
 gma-u.5   100800361   uncharacterized LOC100800361 
 vvi-u.5   100247348   uncharacterized LOC100247348 
 ppo-u.5   7457143   uncharacterized LOC7457143 
 ppo-u.5   7477138   uncharacterized LOC7477138 
 mtr-u.5   11432180   uncharacterized LOC11432180 
 sly-u.5   101246131   uncharacterized LOC101246131 
 sot-r.1   102605407   uncharacterized LOC102605407 
 nta-r.1   107760795   uncharacterized LOC107760795 
 nta-r.1   107825144   uncharacterized LOC107825144 
 nta-r.1   142166262   uncharacterized LOC142166262 
 osa-u.5   4325331   uncharacterized LOC4325331 
 zma-u.5   103644246   uncharacterized LOC103644246 
 tae-r.2   123060434   uncharacterized LOC123060434 
 tae-r.2   123068972   uncharacterized LOC123068972 
 tae-r.2   123077503   uncharacterized LOC123077503 
 hvu-r.1   123442956   uncharacterized LOC123442956 
 sbi-r.1   8057057   uncharacterized LOC8057057 
 bdi-r.1   100829381   uncharacterized LOC100829381 

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Top 50 coexpressed genes to AT4G39420 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G39420 (ath-u.5 coexpression data)

CoexMap"830097"


athAT4G39420 | Entrez gene ID : 830097      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 2 1 1 1 3 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_001154293.2 [sequence] [blastp]
NP_001328119.1 [sequence] [blastp]
NP_001328120.1 [sequence] [blastp]
NP_195652.5 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  plas 4,  nucl_plas 4  (predict for NP_001154293.2)
nucl 4,  plas 4,  nucl_plas 4  (predict for NP_001328119.1)
plas 6,  nucl 2,  cyto 1,  extr 1,  pero 1,  cyto_pero 1  (predict for NP_001328120.1)
nucl 4,  plas 4,  nucl_plas 4  (predict for NP_195652.5)
Subcellular
localization
TargetP
other 7  (predict for NP_001154293.2)
other 7  (predict for NP_001328119.1)
other 3  (predict for NP_001328120.1)
other 7  (predict for NP_195652.5)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G39420
ath-r.7
for
AT4G39420
ath-m.9
for
AT4G39420
ath-e.2
for
AT4G39420
ath-m.4.bio
for
AT4G39420
ath-m.4.hor
for
AT4G39420
ath-m.4.lig
for
AT4G39420
ath-m.4.str
for
AT4G39420
ath-m.4.tis
for
AT4G39420
bra-r.6
for
103847160
bna-r.1
for
106439025
bna-r.1
for
106352043
ghi-r.1
for
107945506
ghi-r.1
for
107925366
cit-r.1
for
102626916
gma-u.5
for
100811665
gma-u.5
for
100800361
vvi-u.5
for
100247348
ppo-u.5
for
7457143
ppo-u.5
for
7477138
mtr-u.5
for
11432180
sly-u.5
for
101246131
sot-r.1
for
102605407
nta-r.1
for
107760795
nta-r.1
for
107825144
nta-r.1
for
142166262
osa-u.5
for
4325331
zma-u.5
for
103644246
tae-r.2
for
123060434
tae-r.2
for
123068972
tae-r.2
for
123077503
hvu-r.1
for
123442956
sbi-r.1
for
8057057
bdi-r.1
for
100829381


Ortholog ID: 9632
Species ath bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT4G39420 LOC103847160 LOC106439025 LOC106352043 LOC107945506 LOC107925366 LOC102626916 LOC100811665 LOC100800361 LOC100247348 LOC7457143 LOC7477138 LOC11432180 LOC101246131 LOC102605407 LOC107760795 LOC107825144 LOC142166262 LOC4325331 LOC103644246 LOC123060434 LOC123068972 LOC123077503 LOC123442956 LOC8057057 LOC100829381
Function* spatacsin carboxy-terminus protein uncharacterized LOC103847160 uncharacterized LOC106439025 uncharacterized LOC106352043 uncharacterized LOC107945506 uncharacterized LOC107925366 uncharacterized LOC102626916 uncharacterized LOC100811665 uncharacterized LOC100800361 uncharacterized LOC100247348 uncharacterized LOC7457143 uncharacterized LOC7477138 uncharacterized LOC11432180 uncharacterized LOC101246131 uncharacterized LOC102605407 uncharacterized LOC107760795 uncharacterized LOC107825144 uncharacterized LOC142166262 uncharacterized LOC4325331 uncharacterized LOC103644246 uncharacterized LOC123060434 uncharacterized LOC123068972 uncharacterized LOC123077503 uncharacterized LOC123442956 uncharacterized LOC8057057 uncharacterized LOC100829381
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath03083 Polycomb repressive complex 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03082 ATP-dependent chromatin remodeling 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 4
bna04070 Phosphatidylinositol signaling system 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 3
bna04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi03082 ATP-dependent chromatin remodeling 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi03082 ATP-dependent chromatin remodeling 3
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830097 103847160 106439025 106352043 107945506 107925366 102626916 100811665 100800361 100247348 7457143 7477138 11432180 101246131 102605407 107760795 107825144 142166262 4325331 103644246 123060434 123068972 123077503 123442956 8057057 100829381
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